EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-11640

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr19:41687460-41688890

Target genes

Number: 10
Name	Ensembl ID

Tm9sf3	ENSMUSG00000025016
Gm340	ENSMUSG00000090673
AI606181	ENSMUSG00000074873
Slit1	ENSMUSG00000025020
Arhgap19	ENSMUSG00000025154
Frat2	ENSMUSG00000047604
Exosc1	ENSMUSG00000034321
Zdhhc16	ENSMUSG00000025157
Mms19	ENSMUSG00000025159
Morn4	ENSMUSG00000049670

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RFX3	MA0798.1	chr19:41687965-41687981	CGTTTCCAAGGCAACT	-	6.17
RFX5	MA0510.2	chr19:41687965-41687981	CGTTTCCAAGGCAACT	-	6.1
RREB1	MA0073.1	chr19:41688250-41688270	TGTGTGTGTGTGGTGTGTGT	-	6.16

Enhancer Sequence

CCTCACAGTT TCCACAGGAG GGTGGGGATC GTGTGCTTAA TCTCGTTGTT TTACTTTAAA 60
ATGGCAATAA TATTTATCAT ATCTATGAGA CTGTCTCTTT TGCATGAAAA AATAAACTTA 120
CAGTAAAAAA AATGTAGCTG TTGGTCTAAG AAAATTTGTG CAGATGGCAT TTACATCTTT 180
TCTGGAGGGC AATGCAAGTA AAAAGGTCTG AAGGTTATGC CACAGCCGCC TTTTGCAGTT 240
TGATTTTAAG CTAGGGTGAC AGGATATTTA TACAGAAAGT CCCTACTGGC AAAATCTAAA 300
CGCATTAGGG AGGTGGAAAG GAGGTCTCCC CTCCTACCTG GTGCTATAGG CTGCCCGGTT 360
GCTGGATATG TAGGGCCACC CCACCTGTCC CCTCTGCCCT GAAGGGGCAT CCCAGCCCTG 420
AGTAGGAGCT GAGGAATGGA CCAGGCGGGA AGCTTAGCCT GAGCTGCTGC CTGCCCCTGA 480
GGAGGGCCTG CCTATTGTAA GGATGCGTTT CCAAGGCAAC TCGGGAGGAG AGGCACTTAG 540
CGCGCTTTAT TTTTTACATC TGGTAATTTG GGTCTGCAGA GGTAGGTTTG GCCATTTCCG 600
CTCGTAGATT CAACATCATT TTCTGAAGAG CCAATTTGTT CAGTAGGCAA TTTATCTCCA 660
GCAACTAAGT ACTGTGTTCC TCAGAAAAGC TCTGGGAGGC CAGGGCTGGG GGCTGGGGCT 720
TCCTGGGGAA AGCAGACGCG CGCGCGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 780
TGTGTGTGTG TGTGTGTGTG TGGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTAA 840
AACATCTGCT CTGGAGGGGT TCAGATACAC TATGTGGGGA GCACAGCTGT GCTCAGAGCA 900
TGGGAAAATA CGGTGGGATT CCTCCCTACA GTGGCCAGTC AGTGAGAGTT GTGTGAAGGT 960
AGAACCCCAG AAGGGGTGAC CAGAATGTGG CTTCGCTTTT GGTCATCTCA GCTATAACAC 1020
AGGGCTGGCT AAGGCCTGCT TGGGTCCTGG CATAACCTCT AGAGACTTGA TCGGCTTAAA 1080
GTGGAGGCTC AGGAGGGTGT GTGGAAATTT AAAAGAGTCT TAGATGTCCC CAACCATTTC 1140
CTGCCACTAC CATGGCGTAT ATTCTTGGCT ATAGGTTGCC AGCATGCAGA GAGACACTCC 1200
TGGCACCTTC ACCAGGAGGC AGCCCCACCC AAGCCCCAGC TCCCTGTCCT GTGAACCTGT 1260
ACTGTCTGGT GCCTGCTGTC CTTCAGGGCT TCCAGGTGAG AGGAGCCTTA AAGAACCGCT 1320
GACGATAATT TGGAGCACAG GTCTGTTCCA GCCTCATCTC CAGCACGAGG AGACTTGGAC 1380
GCTGGGCCCA GCAGCGGTCC CCAACCCCAT CTCAGGCTCC AGGGAACTCA 1430