EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-11449

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr19:10487930-10489220

Target genes

Number: 21
Name	Ensembl ID

Incenp	ENSMUSG00000024660
Fth1	ENSMUSG00000024661
Rab3il1	ENSMUSG00000024663
Fads2	ENSMUSG00000024665
Fads1	ENSMUSG00000010663
Gm10143	ENSMUSG00000064032
1810006K21Rik	ENSMUSG00000036372
Fen1	ENSMUSG00000024742
Gm98	ENSMUSG00000036098
Dagla	ENSMUSG00000035735
Syt7	ENSMUSG00000024743
Sdhaf2	ENSMUSG00000024668
Cpsf7	ENSMUSG00000034820
Tmem216	ENSMUSG00000024667
Tmem138	ENSMUSG00000024666
Cybasc3	ENSMUSG00000034445
Dak	ENSMUSG00000034371
Ddb1	ENSMUSG00000024740
Vps37c	ENSMUSG00000048832
Tmem132a	ENSMUSG00000024736
Tmem109	ENSMUSG00000034659

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr19:10488318-10488333	CGTGGGCGTGGCCAA	-	6.49
SP3	MA0746.2	chr19:10488318-10488331	CGTGGGCGTGGCC	-	6.04
ZNF740	MA0753.2	chr19:10488158-10488171	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr19:10488617-10488630	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr19:10488618-10488631	GGGGGGGGGGGGG	-	6.03

Enhancer Sequence

CTGGTGAGGC TCTTGTTGGG AGACCCTTTG AGGCTCGGCC TGACACTGCA TCAGCCATAC 60
TGCAATCACT GGCTATTGAA TTCTAAAGAC TGGCTAATCA GAAGACCTGC CTGTTTACAG 120
TCAGGGACAT GTGCACAGAA CTTCACACCA CAAACTTGCA CATACTCAAC CCCTTTCTTT 180
GCCTGGGTTC CGGTCCCATA CATCCTTTTA CACCTGGGAG GCATACACGG GGGGGGGGGG 240
GTGTTACACT TGCAGAGCTC TACAGAGGAG CGTGTGCTCA CATGCCCCAC CTCATACATA 300
AAGAACTGCA GGCACACACG CGCAGACTAA GAATTGAGGC CCCTGAACCC TGGTGCATCG 360
CATCCTTCTT TTCCCTCCCC ACGCCCCCCG TGGGCGTGGC CAAGACACAT AGCCTTCTGA 420
CCAATGAGAA GGCACTGCCC GCCCCTCCCC ACCCCCCAGC CGCCTGCACA TCCATCCTGA 480
TTCTCCTGGT TTGTACAAGC ACAAACGGCT TCTTTTCATT TTTAACGAGG GCTGGGGAAT 540
TAACGAGCGG GATTAGGCTA TCAATAAGTA ACGAGACTGT CAGGAGGGAC ATTCATCACC 600
CGAGAGCGCC AGGAGGGAGA GCTGTGAGCC ACTGGTTCCA CCCAAACTCT GCAGCTAGGC 660
AAGTGTTGCA GCTCCGCAGG ACCCCTTGGG GGGGGGGGGG GTGAGGGGGC GGGGAACTTC 720
AGCCTGAGTC CTACCTCCCA CCCTGCCTAG AAGCACAGTT GGACTTGTGA GAGCTACAGG 780
GAGCGATCTC AGAGGTCTGA GATGTCCCAG GTGTAGGCAG GAATCACACA CACACACACA 840
CACACACACA CACACACACA CACACACACA CACACACCCC TTATGCCCAC CGCCTTCTCT 900
AGTTCACAAT GGGATGACTG GAAGCAGCAC ACAGGGAGAA ACCATAAGGA CCACTGAAAG 960
CTGATTCTTA GGCCCTGAGT GGGTAGGGGC CACATGCCCC ACACTCATGT AGGAAGAGAA 1020
GGGGTAGATA CCTCTGGGAA GGGGCTTGGG GTCTGCTGAG GAAACTGGGA GAACCTGAGA 1080
AGCAGATATC CCAGCATGGT TCCTTCAAGA GGGCAAATTC ATTTCCTGGA TGAGCCTCTC 1140
CATTCTGGGG CAGCTCCCAC GGCTGGGGAA GAACCATAGG CTCAGCTCCC TGCATGAGTG 1200
GGACCTGTCC CCTGCTGTGC ACTGGCCTGT GAGCTAGCTG CCCTCCGCTG TTCCTTGCTC 1260
TACTGCCTCA AAATCCCAAG GCTGGAGGGA 1290