EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-11415

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr19:8872170-8872710

Target genes

Number: 27
Name	Ensembl ID

Chrm1	ENSMUSG00000032773
7SK	ENSMUSG00000087830
Slc3a2	ENSMUSG00000010095
Snord22	ENSMUSG00000065087
Wdr74	ENSMUSG00000042729
1700092M07Rik	ENSMUSG00000090840
Stx5a	ENSMUSG00000010110
Nxf1	ENSMUSG00000010097
Taf6l	ENSMUSG00000003680
Zbtb3	ENSMUSG00000071661
Ttc9c	ENSMUSG00000071660
Hnrnpul2	ENSMUSG00000071659
Bscl2	ENSMUSG00000071657
Gng3	ENSMUSG00000071658
Lrrn4cl	ENSMUSG00000071656
Ubxn1	ENSMUSG00000071655
AI462493	ENSMUSG00000071654
SNORA57	ENSMUSG00000070167
1810009A15Rik	ENSMUSG00000071653
Ints5	ENSMUSG00000071652
Ganab	ENSMUSG00000071650
B3gat3	ENSMUSG00000071649
Rom1	ENSMUSG00000071648
Mta2	ENSMUSG00000071646
Tut1	ENSMUSG00000071645
Eef1g	ENSMUSG00000071644
Ahnak	ENSMUSG00000069833

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

POU2F1	MA0785.1	chr19:8872488-8872500	CATTTGCATAAT	-	6.62
POU3F1	MA0786.1	chr19:8872487-8872499	ACATTTGCATAA	-	6.14
POU3F3	MA0788.1	chr19:8872487-8872500	ACATTTGCATAAT	-	6.25
RUNX1	MA0002.2	chr19:8872366-8872377	AAACCACAAAC	-	6.02

Enhancer Sequence

GCCTCCCAAG TGCTGGAATT AAAGGCATGC GCCACCCCCG ACCAGCTTAG CACATGAAAT 60
ATTAAATGAT GCTCTCATGA TGGTACAGTA AATGCCCAAG AAGGCCTAGA TATGCTGACA 120
TACACCTATT CTCTCAGTAC CATGTAGGCT AAGGCAGGAG GACTTGCCAG GGTCAAAGCT 180
GAGACAGGTC TTTCAAAAAC CACAAACGAG TCAGAGAATT GTGATGAAAG CCTTTAATGT 240
CAGCACTCAG TGGCAGGCAG ATCTCTGAAT TAGAGCCCAG CTTGGTCCAC ATAGTGAGGC 300
CATCTCAAAA CTCAAAAACA TTTGCATAAT AACGGTCTTA TCTCACATAA GGGAAGAAAA 360
TTTTCTTTAG TAGCTTTTCA GAGTGTCTAA AACAGGCAAA AACTGGCTGC TTCAGGTGCC 420
TGGAGGGGTG AAAGGGTTCC TCAGAGTAAG CGACAAGCCC TGACAGAAGG AGTTAAGAAG 480
AGGTTAGAGA CTAGCGCCAT TGTGCGTGCA TTCAGCAGAC CTCTCTGTGA AGCAGAAACT 540