EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-11407

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr19:8788380-8788940

Target genes

Number: 28
Name	Ensembl ID

7SK	ENSMUSG00000087830
Slc3a2	ENSMUSG00000010095
Snord22	ENSMUSG00000065087
Wdr74	ENSMUSG00000042729
1700092M07Rik	ENSMUSG00000090840
Stx5a	ENSMUSG00000010110
Nxf1	ENSMUSG00000010097
Taf6l	ENSMUSG00000003680
Polr2g	ENSMUSG00000071662
Zbtb3	ENSMUSG00000071661
Ttc9c	ENSMUSG00000071660
Hnrnpul2	ENSMUSG00000071659
Bscl2	ENSMUSG00000071657
Gng3	ENSMUSG00000071658
Lrrn4cl	ENSMUSG00000071656
Ubxn1	ENSMUSG00000071655
AI462493	ENSMUSG00000071654
SNORA57	ENSMUSG00000070167
1810009A15Rik	ENSMUSG00000071653
Ints5	ENSMUSG00000071652
Ganab	ENSMUSG00000071650
B3gat3	ENSMUSG00000071649
Rom1	ENSMUSG00000071648
Eml3	ENSMUSG00000071647
Mta2	ENSMUSG00000071646
Tut1	ENSMUSG00000071645
Eef1g	ENSMUSG00000071644
Ahnak	ENSMUSG00000069833

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_01390	chr19:8757458-8816492	Th_Cells
mSE_06172	chr19:8785881-8792130	E14.5_Liver
mSE_07808	chr19:8785863-8789080	Intestine
mSE_10189	chr19:8785945-8789091	Embryonic_stem_cells

Enhancer Sequence

CGGCGGGGAA GTGACCCAGG ACTCCGCCCC GGTCCGCCTC TTAAAGAGAT GCAGAGAAGT 60
CTTTTCGCAC CTCCAGCCTC GCTGAATACT CCCGTCTATC CCTAACGCTT ATTCCTGCAA 120
GAGTCTGGGA AGGGGAGCTT GTGGTCAGAA ACCCTTAGAA TAACAAACGT GAATTTGTCT 180
TGACCAGGTT TCAAAGCCCC TCCTCCGACC TTCCGGCCCC TTACCCTGCG AGGCCTCTTT 240
TCTCTCCACA AGATGACACC AGTCTCCATC CACATCGTGA TCCCTTCGCC CCAAGCACGG 300
CTCAGGCTGA TCTCCCCAAC TTCACACAGA CCTTGGCACT ACATCTCACT TCTGCTTTAC 360
GTACATCTTC TCATACTCCG GACTTAGCTG AGTTCCTGGA TTCTCCTCGG GGCTTACACG 420
TACTCACCTT TCAAGACTCC TTGAATTTAA TTCCTCAGGC AGCAACTATT TACTGGGCAC 480
CCACTCCAAT CCTTTGCTTC ATCAACTGCA TAGGATCAAC TCTAATCCGT TCTTCTTGAT 540
TTTAAAATTC AACTGCAGAA 560