EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-11394

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr19:7493290-7494550

Target genes

Number: 20
Name	Ensembl ID

Trmt112	ENSMUSG00000038812
Prdx5	ENSMUSG00000024953
Bad	ENSMUSG00000024959
Ppp1r14b	ENSMUSG00000056612
Fkbp2	ENSMUSG00000056629
Vegfb	ENSMUSG00000024962
Stip1	ENSMUSG00000024966
Macrod1	ENSMUSG00000036278
Otub1	ENSMUSG00000024767
Cox8a	ENSMUSG00000035885
Naa40	ENSMUSG00000024764
Rcor2	ENSMUSG00000024968
Mark2	ENSMUSG00000024969
AI846148	ENSMUSG00000024970
2700081O15Rik	ENSMUSG00000053080
Rtn3	ENSMUSG00000024758
Atl3	ENSMUSG00000024759
Pla2g16	ENSMUSG00000060675
Lgals12	ENSMUSG00000024972
Gm16437	ENSMUSG00000024761

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr19:7493548-7493568

CCCCAAACCAACCAACCAAC

7.28

Enhancer Sequence

GCCAGTCTGC CTTAGATTTA ACAGTGGTCC TGCACTGGAA AGATGCTTAG TAGGATGCTA 60
GCTATTCAGT CAGTGCATTT GCAGACAAAG GCGTATAGGC CCAGAGAGCG GATGTGACTG 120
ACCTACCAAA GGTCACTGGG CAAGGCACCA GTGAAGCCAG ATCTTGAATC TAATGTTTTT 180
TCTATACCTC TACCTTAAAA AAAAGTAATG GAAGACAAAC AAACAAAACC TTCAAACCAA 240
AACAGACAAA AAAACCACCC CCAAACCAAC CAACCAACCA AACAAAAAAC ACCCAAAAAA 300
CCAAAAAACC AAACAACTCC ACACGAGGAC AAGAGCCCTC TCTGATCCTG TCATTTGTTT 360
GTCTGACTCT GGGATTCTGT ACTGAGAGAA TGCCAGAGTC TGCTTGTTTC GTCTTTGTGG 420
CCAGGAGACA GTTTTCTAAA TAAAAAATGG TCAGCCAGCA CTGCAAGGAG GGCTCTGGGT 480
GTCTTTGACA AAGTGAAAGA ACACTAATGG TTGGAGAGGC CCCAGAAGTG CACACTGTTG 540
GGAGGGCTGG CAGCAACCAC ATCCCTGCTA GCACAAATGA GATAAACTAG AACGACTTAA 600
TGGGTGTGAT GGGTGGTGGC TGCTCCCCAG TCTGAAGAGC AGTCGGTAGT CACTCTGCTG 660
GCCCTCCGAC CTCCTCTTTT CGGGTCATTG TGCCTCCCAG ACTCTGGGGA AGTCCAGGTC 720
CGAGAAACTC CTTTCCCTGG AGGTGTTGAC AGCTGTATCT TAGGTGTCCC TCCAGTGGAA 780
GACCTGACAG TTCCTACCTC ATCCTTAAAC TGCTATTTAC AGGATGGCAT ATTGGGAAAG 840
GGAGATAACC TTTGGTGGGT GCCCTCCTGG AGGGGCCTCA GGTGGGTGGG TGTTGTGCAC 900
AGATCTGGGT GCAGACAAAT ACCCCCTATT GTTCCCCTCT CCCTACTGCT TGCTGTATTC 960
TGGCTGTAAC TGCCCAGCCT GCTGAGCTTC TGGCTTTATC CCTCCTTAAA CTCCGTGGCC 1020
TTCACCTTGG TTTTAAAGTC TTCAGCAAGC TAGCCCAGTG CCCACATCTC TTTGTTCTCC 1080
AGCTGGGTCC CTGCTCTCTG TGTGGGTGTT CCAACCCCCT CATCACCCAC TTCCCTTTCA 1140
TTGCTCTTGC CACCCCTCTC TTGCCCTAAC CTCCCCTGCC CCCTTTTCAT GCTTCCAAAT 1200
CAAAGCCCTA GGTCCTTTCT CTGGAAATAG GAAATTGAGA GCCTGTCTCC CTTTTCCCTT 1260