EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-11358

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr19:6930740-6931140

Target genes

Number: 24
Name	Ensembl ID

AC124394.1	ENSMUSG00000092802
Hmgb1	ENSMUSG00000084221
Rps6ka4	ENSMUSG00000024952
Ccdc88b	ENSMUSG00000047810
Trmt112	ENSMUSG00000038812
Prdx5	ENSMUSG00000024953
Esrra	ENSMUSG00000024955
1700019N12Rik	ENSMUSG00000050623
Bad	ENSMUSG00000024959
Gpr137	ENSMUSG00000024958
Fkbp2	ENSMUSG00000056629
Vegfb	ENSMUSG00000024962
Dnajc4	ENSMUSG00000024963
Nudt22	ENSMUSG00000037349
Trpt1	ENSMUSG00000047656
Fermt3	ENSMUSG00000024965
Stip1	ENSMUSG00000024966
Macrod1	ENSMUSG00000036278
Flrt1	ENSMUSG00000047787
Otub1	ENSMUSG00000024767
Cox8a	ENSMUSG00000035885
Naa40	ENSMUSG00000024764
Rcor2	ENSMUSG00000024968
Mark2	ENSMUSG00000024969

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr19:6931120-6931132	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr19:6931124-6931136	GTTTGTTTGTTT	+	6.32

Enhancer Sequence

ACCTGAGGGC ACAGAGAGCA ATACATCAGG AGGTGAAGGT GGCTTCAGGG GTAGCAACAA 60
ATCCCCTGTG CCACCCACCA CAGTACCTAG AGATCAGGAG TTAGACATAA TTCCTGGTAG 120
ACAGACAGAC AGGAAGAGCA GCCATGACAT GGAAGAGGTG GCAAAGCTCT TCCAAGATGG 180
CCAGCTTCCT CCTCAACCTG CTTACTTAAG ACAAAAGCCT GGCAGCTTTT GCCGCCCACT 240
AGTGGACCCT TGCTGACATA CTGGCTCAAC AAGTTCAAGG CCTGATGAGG ACATGTCACA 300
CAACAGTCTC TGACCAGAGA AAATAGGGTG AGGAAGACTT CTCAGAGTCT TTAAAACCGC 360
AGGCCTCCAG AGGAGACCGG GTTTGTTTGT TTGTTTGTTG 400