EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-11351

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr19:6905930-6906250

Target genes

Number: 26
Name	Ensembl ID

Hmgb1	ENSMUSG00000084221
Rps6ka4	ENSMUSG00000024952
Ccdc88b	ENSMUSG00000047810
Trmt112	ENSMUSG00000038812
Esrra	ENSMUSG00000024955
1700019N12Rik	ENSMUSG00000050623
Bad	ENSMUSG00000024959
Gpr137	ENSMUSG00000024958
Plcb3	ENSMUSG00000024960
Ppp1r14b	ENSMUSG00000056612
Fkbp2	ENSMUSG00000056629
Vegfb	ENSMUSG00000024962
Dnajc4	ENSMUSG00000024963
Nudt22	ENSMUSG00000037349
Trpt1	ENSMUSG00000047656
Fermt3	ENSMUSG00000024965
Stip1	ENSMUSG00000024966
Macrod1	ENSMUSG00000036278
Flrt1	ENSMUSG00000047787
Otub1	ENSMUSG00000024767
Cox8a	ENSMUSG00000035885
Naa40	ENSMUSG00000024764
Rcor2	ENSMUSG00000024968
Mark2	ENSMUSG00000024969
AI846148	ENSMUSG00000024970
Rtn3	ENSMUSG00000024758

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP2	MA0516.2	chr19:6906081-6906098	ATAAGCTCCGCCCCCTT	+	6.55
SP4	MA0685.1	chr19:6906082-6906099	TAAGCTCCGCCCCCTTC	+	6.36

Enhancer Sequence

TGTGTAGCTG CGGGATGCAA GGCACGTCAC TACCACCACC TGCCCGCTCG GGTATCGCGG 60
GAGCCCCATA TTCCTGGATT CCCCACCCCC ACCTCAAACA AACAGCTTTT CAGGACACCA 120
TTCTTTATCC ACGTTTAACC ACACCCATCC CATAAGCTCC GCCCCCTTCC TGAGCATCCT 180
CCTCACATTC CTTTCCGGCT CCATCCTCAG CAGTGTCCCT CAGTCCTCAG GCCTTATACC 240
CCTCAGATCC CACTTCTGGA GTCTCTCTCT CTCTCTTCTC TACCACCCCC CACTCCACAC 300
AGGCTGTCCC TAACAAGCAT 320