EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-11272

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr19:4615660-4616000

Target genes

Number: 20
Name	Ensembl ID

Ndufv1	ENSMUSG00000037916
Gstp1	ENSMUSG00000060803
Cdk2ap2	ENSMUSG00000024856
Aip	ENSMUSG00000024847
Tmem134	ENSMUSG00000024845
Coro1b	ENSMUSG00000024835
Rps6kb2	ENSMUSG00000024830
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824
Rhod	ENSMUSG00000041845
Rce1	ENSMUSG00000024889
Spnb3	ENSMUSG00000067889
Rbm4b	ENSMUSG00000033760
Rbm14	ENSMUSG00000006456
Ccs	ENSMUSG00000034108
Mrpl11	ENSMUSG00000024902
B3gnt1	ENSMUSG00000047379
Brms1	ENSMUSG00000080268
Cd248	ENSMUSG00000056481
Rab1b	ENSMUSG00000024870

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5

MA0599.1

chr19:4615803-4615813

GCCCCGCCCC

6.02

Enhancer Sequence

ACAACCGTTC TGCATCACCG CGTCACGTGA AGAATCCCCC ACAGGCCCGG GCCCTTTGGG 60
GGGGGGGGTG CGGGCTGGGG TGGCGCCCCC AACAGGGCTT CTGCGGGTGG GGCCTGAGGG 120
CTTGGCCAGG GGACTGGCGT CGTGCCCCGC CCCACCGCGC CCCTCCCTTC TCTGCTCGGT 180
CTCCCTCCCG CCCTGCCGGG CGCTCCCCAG CCAACCGGCC TCCGCCTCCG GCTGGATTGG 240
TCTGTGCTGC GCGGTTTCCC AGCAGGCTGG CTGTGGCACG CTGTTTGAAG CTGTGCGTCA 300
GTGGTCCTCT CCGTGTCATA GCTCCGCCTT CCCTCTTCCA 340