EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-10682

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr18:38672190-38673010

Target genes

Number: 11
Name	Ensembl ID

Hdac3	ENSMUSG00000024454
2010320O07Rik	ENSMUSG00000089983
Pcdh1	ENSMUSG00000051375
0610009O20Rik	ENSMUSG00000024442
Pcdh12	ENSMUSG00000024440
Rnf14	ENSMUSG00000060450
Gnpda1	ENSMUSG00000052102
Ndfip1	ENSMUSG00000024425
Spry4	ENSMUSG00000024427
Arhgap26	ENSMUSG00000036452
Gm15335	ENSMUSG00000083766

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr18:38672288-38672309	TCCTTCCCATCACCCTCCTCA	-	6.25
ZNF263	MA0528.1	chr18:38672822-38672843	GGAGCAGGAGGGAGGGGTAGG	+	7.02

Enhancer Sequence

CCCCCCCCCC CGTGTCCAGC ATGCAGCAGC TTGCCAATTT CTATTGCTAA ACATGCTGGT 60
CTCCTTTGAC CCTAACTCAA AAGGCTTGAC CTCTTTCCTC CTTCCCATCA CCCTCCTCAC 120
CAGCCACCCT TCTATTTTTC ATCCAAACTC TAATAAATAA AATGGTCTTC AGTCTTCCTT 180
TTGAGAGCAG TTTTAGGTTC CTCTGTTACA AAGACGCAAG TGGGAACTCC AGTTTCTCCA 240
GTAACACCAT TGTCTTCTCA CCTGATGCTT GAGCTTGGGG CCCACGAGCC AAGCAGAGGA 300
AGGGGGGTAT AAAGTAAGAA CAAGCAAGAA CCAGCTGGGG CACTTGCAGT CCGAGCCTGC 360
CCTTCTCAGC TGCATCTAGT TGGGATGTGT GCCTGGCAGG CACAGCCTTC ATTACCGAGC 420
TTCCTCCATA CCCAGCCAGG TGGAAGGCAG GAGATTGCAG GCAGCGGAAC AGCAGCAGCG 480
ATAAGCAGGG CGGCTTGCTG CACAGCCATC TCTTGGCTCA CTCCAGCTGG CTCCACAGAG 540
GCAAGAGACA TCTGGAGATG GGACTCAGTA CTTCCTAAAC TGATGCCTTG CAAAGCCAGC 600
AGTGCTGATG GTTTCCAGGA CATACTGAGG AGGGAGCAGG AGGGAGGGGT AGGAAACACG 660
CTTCTATAAA AATCAGTTCC ATCTGTATAC ACATGGGAAC GTGCTTGCAG AGACGAGCTT 720
GGAGAGATAA ACACCACCTA TGGTCACTTC TGGAAAGTGA TGGAAGCCAG AGAAAGGGGC 780
CAAGGAGACC GTGAGCTTAT CTATATTTAA TAACAATTGA 820