EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-10673

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr18:38368780-38369210

Target genes

Number: 11
Name	Ensembl ID

Pcdhga9	ENSMUSG00000023036
Diap1	ENSMUSG00000024456
Hdac3	ENSMUSG00000024454
Fchsd1	ENSMUSG00000038524
Arap3	ENSMUSG00000024451
Pcdh1	ENSMUSG00000051375
0610009O20Rik	ENSMUSG00000024442
Pcdh12	ENSMUSG00000024440
Rnf14	ENSMUSG00000060450
Gnpda1	ENSMUSG00000052102
Ndfip1	ENSMUSG00000024425

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_04219	chr18:38368769-38375092	Cortex
mSE_07596	chr18:38363012-38371661	Intestine
mSE_08522	chr18:38363955-38372562	Liver
mSE_10826	chr18:38368728-38373261	Olfactory_bulb

Enhancer Sequence

AAAATCCATC TCTGCAACAC CAACTACCTT TGTTCCTCGC AGGGGCACCT CTCACCCCAC 60
AACAGAAACG GAACTCGGAT TCCCTCTTAG CTCCTCCCCA CCCATGCAGG CCCCATTCCA 120
CAGTGTCTCT TGCCCAGCTC TCAGCAGAAG TCCCCAGAGC TGGGAGATAG ATACTCCTTT 180
ATAGCTAGTG CCTTCTAATA TGGAACTAGA GATGGTAGGA GAGGAGGCTA GATGAGGCTG 240
CTCTAGAGCC CCGACCCTGT TCCCCCTACC CTATTTTTCC TCCTTTCTGA GGTTTCTTAG 300
ATTCTCTCCT GGAATCCATC CTCTGCCCTC GCCCAGTTAT TACAGGTTCC AACACCACCG 360
CGGACCCCCC TACTCAAGAA AGTAGCACCC AGGTGCTCTC ACACACTAGA CCTCTAAGGC 420
TGCCACAAAT 430