EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-10153

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr17:66233500-66234010

Target genes

Number: 8
Name	Ensembl ID

Vapa	ENSMUSG00000024091
Rab31	ENSMUSG00000056515
Ppp4r1	ENSMUSG00000061950
Ralbp1	ENSMUSG00000024096
Twsg1	ENSMUSG00000024098
Ankrd12	ENSMUSG00000034647
Ndufv2	ENSMUSG00000024099
ORF19	ENSMUSG00000024101

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr17:66233860-66233874	GGCCACGCCCCCCA	+	6.83
KLF16	MA0741.1	chr17:66233861-66233872	GCCACGCCCCC	+	6.62
SP1	MA0079.4	chr17:66233858-66233873	GCGGCCACGCCCCCC	+	6.05
SP3	MA0746.2	chr17:66233860-66233873	GGCCACGCCCCCC	+	7.22
SP8	MA0747.1	chr17:66233861-66233873	GCCACGCCCCCC	+	6.44

Enhancer Sequence

GGTCGTCCCC TTGCCCAACG CCTGCCACGG GCGACAACAG GAGCTGTTCC CCCGACTCTA 60
CCCGGCAAAC ACGGAGACAG GTGGGCGAGC CAGATGCGCG AGGCAGATGC GACCCATAAA 120
CCGGAAGGCT TGCGTCAGGC CAGTCCCCGG CCGCAGCTCC GGCCAGGTGT GGCCCGCAGG 180
GATGCCCCGA GGCCTGGAAG GGTCCGAGGA AGCAGCTGGA CTCCCAACTA GCCTCTGGGT 240
CCCAGAGCAA CACAGGACAC ACCCGGGTGC TCCCAAGGAG GCCTGTCGGG CAGGCGGCGT 300
GACCCACCCC AAAGGAGCAA GCTCCGGGGT GAAGCTTTCA CGGACAACGT AAGGCGGGGC 360
GGCCACGCCC CCCACCCCCA ACTCCCATTC CGAGCCCGGG ATCCCAAGCC CGGCACGCTG 420
CGTGACAGGC GCGGGCGCGA GGCCGGGCGC CCGACGGCTC CCACGGACAC CGCCGCAGCG 480
TTGCGACCCC CGCGAGCGTC CGCTCCCCGC 510