EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-09981

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr17:46621260-46621880

Target genes

Number: 25
Name	Ensembl ID

Mad2l1bp	ENSMUSG00000034509
Gtpbp2	ENSMUSG00000023952
Polh	ENSMUSG00000023953
Xpo5	ENSMUSG00000067150
Crip3	ENSMUSG00000023968
Gm5093	ENSMUSG00000091742
BC048355	ENSMUSG00000040658
Cul9	ENSMUSG00000040327
Srf	ENSMUSG00000015605
Ptk7	ENSMUSG00000023972
Klc4	ENSMUSG00000003546
Mrpl2	ENSMUSG00000002767
Cul7	ENSMUSG00000038545
Rrp36	ENSMUSG00000023971
Klhdc3	ENSMUSG00000063576
Mea1	ENSMUSG00000002768
Ppp2r5d	ENSMUSG00000059409
Pex6	ENSMUSG00000002763
Gnmt	ENSMUSG00000002769
Cnpy3	ENSMUSG00000023973
Ptcra	ENSMUSG00000036858
2310039H08Rik	ENSMUSG00000062619
Rpl7l1	ENSMUSG00000063888
BC032203	ENSMUSG00000036568
Tbcc	ENSMUSG00000036430

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EOMES	MA0800.1	chr17:46621448-46621461	GAGGTGTGAAAAA	+	6.74
RUNX1	MA0002.2	chr17:46621435-46621446	AAACCACAAAC	-	6.02
TBR1	MA0802.1	chr17:46621449-46621459	AGGTGTGAAA	+	6.02
TBX2	MA0688.1	chr17:46621448-46621459	GAGGTGTGAAA	+	6.14

Enhancer Sequence

CTGGGGGAGT GAGGAGGGGC AGTGAACGCC TGGCTGCCAT CCTAGACCAC CCGACAGCTC 60
AGAAGGGAAC CCCATCCTGC TGGCAGGCAC CCTTCCCAAG CCCACTGGGT AGATGCTCCA 120
GGAGTTACTG GGGAAAATAC TCCTAGCGAT GGCGGTCAGT GAAAGAGAGA GTTATAAACC 180
ACAAACAGGA GGTGTGAAAA ACCAGCAGTA GGACACACAC ACACACACAC ACACACACAC 240
ACACACACAC ACACACACAC ACGGTGAAAA CAGGAAAGGG CAGTGATGTG TGAATAAGCC 300
AATGGGGAAC TGCTTACCAT AGAGACACTG CAAACTAATG AGTGAAGATG TGTTAGCCAG 360
CCGGCATCCT AGCCCGAGAC CCAAGAATGA CTAGCCTGAG TCACTCTACC TGCTGAGTAG 420
AGTACGCCAC GGGATACCCC ACATCAGAGT GGCCAGCCAG CCAACCAGAG AGATGTGACC 480
ATCAAGAAAA ATGCACAGTA GCCCCTAGAG GGTGGTGTGG AGGCAGATGG CCTGTTGAGA 540
GGCACACACT GCACTCAGTA GGGGAGCTGA CCCTGATGGC TGCTCTAAGA CTGGGGAAGC 600
CAGGATGTGA ACACAAGACC 620