EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-09965

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr17:46100150-46101460

Target genes

Number: 21
Name	Ensembl ID

Cdc5l	ENSMUSG00000023932
Nfkbie	ENSMUSG00000023947
Slc35b2	ENSMUSG00000037089
Hsp90ab1	ENSMUSG00000023944
Slc29a1	ENSMUSG00000023942
Capn11	ENSMUSG00000058626
Mrpl14	ENSMUSG00000023939
Tmem63b	ENSMUSG00000036026
Vegfa	ENSMUSG00000023951
Mrps18a	ENSMUSG00000023967
Rsph9	ENSMUSG00000023966
Mad2l1bp	ENSMUSG00000034509
Gtpbp2	ENSMUSG00000023952
Polh	ENSMUSG00000023953
Xpo5	ENSMUSG00000067150
Polr1c	ENSMUSG00000067148
Yipf3	ENSMUSG00000071074
Gm88	ENSMUSG00000071073
Tjap1	ENSMUSG00000012296
Abcc10	ENSMUSG00000032842
BC048355	ENSMUSG00000040658

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF1	MA0486.2	chr17:46100881-46100894	ATCTAGAACATTC	+	6.03
HSF2	MA0770.1	chr17:46100881-46100894	ATCTAGAACATTC	+	6.04
RREB1	MA0073.1	chr17:46101373-46101393	TCCCCAACCCCCCCCCCCCA	+	6.21
RREB1	MA0073.1	chr17:46101374-46101394	CCCCAACCCCCCCCCCCCAA	+	6.55
ZNF740	MA0753.2	chr17:46100195-46100208	CCACCCCCCCCAA	+	6.37

Enhancer Sequence

GTGAATTCTA GGACACCCAG GGCTACACAG AGAAACAGTC TCAAGCCACC CCCCCCAAAA 60
GAGAAAAAGA ACCACATGGC TTCCTCAAAG GCCAGTCTGA CATAGCTGAC AGCAACCTTC 120
CTAACTACTA AACAGAATGT GCAACCTCCA AGGAGAAAGG GTGGAGTGGG GGACTTGATG 180
GCTTGACTGC TTCACTCCCC ACCTCCTCTC TTGTCCCTCA GCCTTCTTAA TGAATGCCAG 240
AGCAGCCAAT GGGAAGCTTG GAAAATCCAC AGGCTGCAGC AGCTGTATGT CCCAGGGAAG 300
AAGGGCTGCC CTGTCCCAGG AACCCTTATT AAAAACAGCC TCCTGCCCCT GGGCTCCACA 360
CATGCTGAGA GATTTCAAGA AAGGAAAGGA ATCCCCGCTT CCAGGAGCCA CCCTCTAAGG 420
AAAAGGACCT TGGGCCCCTT CCTGCCTGGA CAAGGCTCTC TGACTCACCG AAGGGGAGGC 480
TGTACGCTGG GTTGTTTTAC AGAAGTTTGT TTATCACCTG TTCAAGACCC CATCATGAAA 540
CTTTATAGAC CTGGCTGGGA AATATGGTGA TGTCTAGTCC TGAGTCATTG GACTTGACAG 600
TGGCATGAAG AAAATTAGAT CTAAAACACA AAACAAAACA AAACGCATAC ATAAACAATA 660
CAAAGAACCC CCCACCCCTG CAAACCAGCA GCTTCCGTGC CTAGGACCCA CAGTGTTCTC 720
CTACAGTGCT GATCTAGAAC ATTCCACTAT CGAGGCATCT GCTAAGACAT TGCCCCTCAT 780
AGCTGAGAGC AAGCAGAGCA GCCTGGCCTC CCAAGGATGG ATGCTTCATG GACTAGAAAA 840
GTCACCACTC AAGTGGAGGT CTTGGGCAAG ACCTGCAGAT GGCTCTGGAG ACTCAGAGAG 900
CCCCAGTCAG AGGGAAGAGC CCAGCCCTGC CCTCAGGGAC TACTCAGCCT GAAGAGGGTT 960
AAATAATTCC TTGGCCAGAC CTTGTTTTTC TGAACAGGTG AAGGGGAAAG GACCCAGCTG 1020
TCACTTAGCA GGCTCATTAG TGATGGCTGC TGAGGCCTTG TCCTCCCCAG GGGTAATTAT 1080
TAACATGTCT TGGGTGTGAG GGAGCATGTA GCTCAGGCCC CTCCCTCCCA CTCAACTGCC 1140
TGAGCCAGCT GGGCATCCAG AGCTGAGAGT CTACATGGAC AAATCCCCTG AACTCAAGGG 1200
ACCTGCTATG CTGTCCCTCC CTGTCCCCAA CCCCCCCCCC CCAACATCCT CATCCTAGAA 1260
CCGTATCAAG TCAAGCCAGC TCCATGTTTG GTGGGCTAAA CTTTTTCAAA 1310