EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-09886

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr17:36033610-36034130

Target genes

Number: 20
Name	Ensembl ID

H2	ENSMUSG00000060550
Tcf19	ENSMUSG00000050410
Vars2	ENSMUSG00000038838
Gtf2h4	ENSMUSG00000001524
Ier3	ENSMUSG00000003541
Flot1	ENSMUSG00000059714
Tubb5	ENSMUSG00000001525
Mdc1	ENSMUSG00000061607
Nrm	ENSMUSG00000059791
Ppp1r18	ENSMUSG00000034595
5530401N12Rik	ENSMUSG00000087443
Dhx16	ENSMUSG00000024422
Atat1	ENSMUSG00000024426
Mrps18b	ENSMUSG00000024436
Ppp1r10	ENSMUSG00000039220
Abcf1	ENSMUSG00000038762
Gnl1	ENSMUSG00000024429
Prr3	ENSMUSG00000038500
A930015D03Rik	ENSMUSG00000092368
Rpp21	ENSMUSG00000024446

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr17:36033792-36033803	GGGGGCGTGGC	-	6.62
KLF5	MA0599.1	chr17:36034084-36034094	GCCCCGCCCC	+	6.02
NRF1	MA0506.1	chr17:36034066-36034077	GCGCCTGCGCG	+	6.14

Enhancer Sequence

GCACCATTAA ATGACAATCG GGCCGATTGC TGAAGGGTGA ACTCGGTCAC TAACGCTGCT 60
ACTGCAAGGA TGGCAGGTCA CCCGAGGTCA AGCCTGATTC CAAGTCCCTT GGCGCCCAGG 120
AACCCCAGGG GCAGGGGGTC CATGGGGCCT GGCCGAGCCC TCTGGGAGCC TTCCCCGTCG 180
CCGGGGGCGT GGCCGTGCTC CCGCCGTCCC CCGGAGCCCG ACCCGGTGCA GCGGCCAGCC 240
TTTCGGGCAG GACCGTTCTG CAGGTGCACC ACAGGCCCGC AGTTCCGGCC TCTCTGCCCT 300
GCCCTTCAAG TCACCTCCAG GCACAGGTAA GAACGGCGGG GACCGGGGCC ACCCGGGATA 360
GCCGCTCCCC GGACCTCACC GGGAACGCCG GCCCTAGCGG GCCCCGCGCC CCTCACACGT 420
GCAGCACACG GGTGGTCAGG GGCGGCGGGG GCCTCTGCGC CTGCGCGGCC CGGCGCCCCG 480
CCCCTCGGCC GGCTCTGAGG AGGGTCTCCG CCCGCCCCTC 520