EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-09879

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr17:35840600-35840860

Target genes

Number: 25
Name	Ensembl ID

Clic1	ENSMUSG00000007041
Csnk2b	ENSMUSG00000024387
Ddx39b	ENSMUSG00000019432
Vars2	ENSMUSG00000038838
Gtf2h4	ENSMUSG00000001524
Ddr1	ENSMUSG00000003534
Ier3	ENSMUSG00000003541
Flot1	ENSMUSG00000059714
Tubb5	ENSMUSG00000001525
Mdc1	ENSMUSG00000061607
Nrm	ENSMUSG00000059791
Ppp1r18	ENSMUSG00000034595
5530401N12Rik	ENSMUSG00000087443
Dhx16	ENSMUSG00000024422
Gm16279	ENSMUSG00000084998
2310061I04Rik	ENSMUSG00000050705
Atat1	ENSMUSG00000024426
Mrps18b	ENSMUSG00000024436
Ppp1r10	ENSMUSG00000039220
Gm9840	ENSMUSG00000049832
Abcf1	ENSMUSG00000038762
Gnl1	ENSMUSG00000024429
Prr3	ENSMUSG00000038500
A930015D03Rik	ENSMUSG00000092368
H2	ENSMUSG00000053835

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

mSE_02616	chr17:35833781-35868661	HFSCs
mSE_04413	chr17:35833785-35842488	E14.5_Brain
mSE_04891	chr17:35840549-35842451	E14.5_Heart
mSE_08231	chr17:35840548-35842550	Kidney
mSE_11359	chr17:35840550-35842523	Placenta

Enhancer Sequence

GAGAGAGAGA GAGAGAGACA CGGGGGCTGG GTGGGCAGAC TTAGGAAGGA AGGACAACTT 60
CGAGACGGAT GGAAGGGCCA GAGATAGAAT TAAACCTGTC TCCAGGCCAC CAAGGCCCCG 120
CCCTCATTCT GGTCAACCTG TTTCCACACG GGGCCTCCAT CCTACTCTCC TCCCACCACA 180
AGGCCTACCT GGTCCCTCCC CACAAAAGCA GCCCAGCCCC AGGCCTGCTC CGGCTCTCCC 240
AGGTGAGCTC TATCTAACTT 260