EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-09716

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr17:29355080-29355660

Target genes

Number: 19
Name	Ensembl ID

Mapk13	ENSMUSG00000004864
Pxt1	ENSMUSG00000045378
Kctd20	ENSMUSG00000005936
U2	ENSMUSG00000084632
Stk38	ENSMUSG00000024006
Gm16196	ENSMUSG00000086154
Srsf3	ENSMUSG00000071172
Cdkn1a	ENSMUSG00000023067
Rpl35a	ENSMUSG00000067575
Cpne5	ENSMUSG00000024008
Ppil1	ENSMUSG00000024007
BC004004	ENSMUSG00000052712
Pi16	ENSMUSG00000024011
Mtch1	ENSMUSG00000024012
Fgd2	ENSMUSG00000024013
Pim1	ENSMUSG00000024014
Tbc1d22b	ENSMUSG00000042203
Ftsjd2	ENSMUSG00000024019
Rnf8	ENSMUSG00000090083

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HEY1	MA0823.1	chr17:29355117-29355127	GGCACGTGTC	-	6.02
HEY2	MA0649.1	chr17:29355117-29355127	GGCACGTGTC	-	6.02
Npas2	MA0626.1	chr17:29355117-29355127	GGCACGTGTC	+	6.02

Enhancer Sequence

GTGTGTGTGT GTGTGTGTGT GAACAGGGCC ACATGAAGGC ACGTGTCTAG CAGCACGAAA 60
GATCAGTCTG AATATTTCCA CGAGCCACCA TTCCCAGCTG GTGTCCAGAT GTTAAATGGT 120
CTGGATTGCT CACTGAGTAG TGCTCTTGCA GAAGCTGAGA GCAGCTGTGG TGGTAGCCTG 180
GATTGCATGC CCTACAGATG GTTTGGGGGT GATGAGAACA CCCAAAGCTT TGCCTCTTCT 240
CCATGGGGAC CTCAGCTTGG ACAATCAGCT GATGGGGGGT GGGACTCCCC TCTTTCAAAT 300
GCAGGAGTCC TGAAAGCTTT TCTTCTCAAA TGATCTGTTC TGAGACTCTG TCCCCTGGCC 360
ACCTGAGGAC GCGCAGGAGG TCCAGGCAGG GCCTGATGCA GATACTGCTC AATTTCCTGG 420
GCTAAAATTA CATCTTAGAG TCAATTTTCA TAAAATACGG TGACAGATTT AGGTGCTGAG 480
AAGATGGGGC TTTCTCAGAA GGCATAAAAA TGACCCAAAT GGTTAAAATC AGCTGGAAAC 540
AGACAGGCGG GGCCTATGAG GGCAGCCTCC TCCTTTCCAC 580