EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-09660

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr17:28237720-28239460

Target genes

Number: 21
Name	Ensembl ID

Hmga1	ENSMUSG00000046711
Rps10	ENSMUSG00000052146
Rps2	ENSMUSG00000080731
D17Wsu92e	ENSMUSG00000056692
Snrpc	ENSMUSG00000024217
Uhrf1bp1	ENSMUSG00000039512
Taf11	ENSMUSG00000024218
Anks1	ENSMUSG00000024219
Gm15597	ENSMUSG00000085846
4930526A20Rik	ENSMUSG00000085521
Tcp11	ENSMUSG00000062859
Scube3	ENSMUSG00000038677
Zfp523	ENSMUSG00000024220
Def6	ENSMUSG00000002257
Ppard	ENSMUSG00000002250
Fance	ENSMUSG00000007570
Rpl10a	ENSMUSG00000037805
Tead3	ENSMUSG00000002249
Tulp1	ENSMUSG00000037446
Srpk1	ENSMUSG00000004865
Mapk14	ENSMUSG00000053436

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arid3b	MA0601.1	chr17:28238311-28238322	ATATTAATTAT	+	6.02
ZNF263	MA0528.1	chr17:28238863-28238884	GGGGAAGGAGGGAGATGGGAG	+	6.14
ZNF263	MA0528.1	chr17:28238866-28238887	GAAGGAGGGAGATGGGAGGGA	+	7.32
ZNF263	MA0528.1	chr17:28238856-28238877	GGGGGAGGGGGAAGGAGGGAG	+	7.38

Enhancer Sequence

GAAAAGAAAA AAAGAAAACC CAAGTTCAGT TCTTAACACA TCAGGAGACT TAGCAACCTG 60
TCTCCAATTT CAGGGGATCT GATGCCCTCT TCTGGCTCCC AAGAGAACTG CACACACATG 120
ACATGTACAC ACTTGGAAAC ATGCACAATT TTTTTTTTTT TCCTTAAAGA CTAGCATAGG 180
GCTTGGGGGT GGGAGGTGGG GCGGCTCAGG AGGCAGAGTG CCTGTCTAGC ATATACACAG 240
AGCTCCAAAC AGAAGTCTGG ATTCATGCTT AGCTGAATAG GGAATGTGAG GCCAACCTGG 300
GCTACGTAAG GCCCTACCTC AAAAACTTGC AAAACCAGAC TCCCTGGTTT CCATAGTCCA 360
CTAAGCTGTA TTACCCTGTG TTTTCTGTCC CTGTGCTCTA GTTACTTTGG TCTTTGGTGA 420
CAGGATCTCT ATGTAACCCT GACTGTCCTA AAACTCGGGT ATGCAGAGCG GACTGGTCTC 480
GAACTCCCAG ATCCACTCAC ATCTGCTGGG ACCAAAGGCA TGTGCCACCA CACCAGCTTT 540
ATGTTGGTGT TTTAAGACAA AGGAAAATCC CTGCTGTTAG GGGAAATTGT CATATTAATT 600
ATATGAGTGT CTGATTCCCA ACCGAATCAT TGCAGACAGT TGATCATCGT CTCAGAGATA 660
GGTGGGCACA TGTGGGGACC ACTCTTAGGG GCTGACGGCT CTCAAAGCAC CCCTGACAGA 720
CACTCGGGTA ATGAGGGCAA TCTTCCCAAG ACAGATCTAA ACCTGACTTT TATAGCATCG 780
AGGGGGGAAA GGCAATTTAC ATGAGGAGAA ATGAGAAACA GTGATTAAAT CAAAGCCGCC 840
CTGGGCAGCC TCTCCCCCCT CGGCTCATCT GAGAACAGCT TCGCTTCAGT TCCGCTGCTG 900
AGCTCGGCTG CTTGCTCCAG TGGGCCAGAG CCCACACTCT ATAAATCCTC TCCGCCCTTA 960
CCCTGGAGTT GCTGACTATA TGCATTTTGC GTCCCTGCAT TAAGTCCCTC ATTCTTGGCT 1020
GGTGACATGA AGATTTGTAA CTGATAAAAT ATATTTTTAA TGTGTTTCCT TCAGGTTACC 1080
ATTAAATACA TGCAGTTTAT CTGACCTTGC AAAAGGTTCT GATTCCATTT AGAGAGGGGG 1140
GAGGGGGAAG GAGGGAGATG GGAGGGAGGG CATGTGTTGT TACTGAAACA ACTTTCCAGT 1200
ATCCAGTGGG CTGGGAAGCC CAGTGGTTCA GGGCCAGTCC TGCACCTCCC ACCCAGTCTG 1260
GTCTTTCTCT CCCCCCACCT CGGCTTTCCT GGGTATGAAG TGAGGATAAA TATTTGTCTA 1320
CGAGATGAGG CAGTTGTAAG GATTAATTGG TCGGTGCTCC TGAGAAGCCT TTGAAGATGA 1380
AAAGAGGCTC CTTGCGGATG CTAAGTAAAC TCAGAAAGTG TCTGGCTTTA ATGAGCCAGC 1440
AAGGGAGGCT GGAGATTAAC TGTGCCTTGC CCAGCTCCTG CCTGCATGGG CCCGGTTGGC 1500
GGTCCCGAGC TCGCGCGGCT CCATCCATCC TGGCTCCCCT GGCTCCTGGT GCATTGGTCC 1560
TCTGATAATA CTGTATGCCC AGGGAACCCA AGTGGAACTG AACCCCAGAC TTGAAGGTCA 1620
AGAGAGCCCA GACCTTAAAG CACAATTCTG GTGCAGGGCC TGGGCAAGTT TCTTAACAGA 1680
GTGTCAGTTC CCTGTTTCTA AACACAGCTA GCAGCAACTG AACCTTTATC AAACCCTAGG 1740