EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-09508

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr17:23735450-23736110

Target genes

Number: 16
Name	Ensembl ID

Zfp213	ENSMUSG00000071256
Zscan10	ENSMUSG00000023902
Mmp25	ENSMUSG00000023903
Ccdc64b	ENSMUSG00000043782
Hcfc1r1	ENSMUSG00000023904
Thoc6	ENSMUSG00000041319
Tnfrsf12a	ENSMUSG00000023905
Cldn6	ENSMUSG00000023906
Cldn9	ENSMUSG00000066720
Pkmyt1	ENSMUSG00000023908
Paqr4	ENSMUSG00000023909
Flywch1	ENSMUSG00000040097
Flywch2	ENSMUSG00000023911
Srrm2	ENSMUSG00000039218
Tceb2	ENSMUSG00000055839
Prss41	ENSMUSG00000024114

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr17:23735965-23735985	CCCCCAAACCACCGCAACCA	+	6.12
RREB1	MA0073.1	chr17:23735966-23735986	CCCCAAACCACCGCAACCAC	+	6.37

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10129

chr17:23734722-23740082

Embryonic_stem_cells

Enhancer Sequence

CGTGTGCCTG TATACATATG TATACAGCAG GAACACATAT ATACATACAC ATATAAACAC 60
AAAACAAATT TGTAACAGTC ACAGGGAGAG AGTCCTTAAG AAACATTGTC CTACGACTCA 120
CTAGTAACTG AACACAGTAG ACAGTGTACC CACCGCGTCC TACGCACATT GTGTTCCCTA 180
ACTGCCTGCC AGTTTGAGGA GAGGTTTTTC TGACCCAGCA GTTCCCTGCT CCCTCCCTTG 240
TGGACCTTGG TTCTGCTGGA CCACCAGTCA AGGGCCCTCT GCTGGGTACA CGATGGTTTC 300
TGCTTCCCCA GGGTGGGCGG CTGCCTCCAC TAGAGTTCAA GAAGCAGGAT AGGTTCATGT 360
CTACGGTTAG TGTGTAGGCT AGTGTGTAAA GGTGAACATG TGCGGGCTCA GACCACGCAG 420
AGAAGCAGGA GTTGGGGAGC CTGTTTACAC AAGCTGTAAA CTCGTCAGCC TTCCTCCCTA 480
CTCTCAGAAC CTTTGTTGCG CCCCCTCCTC CCCGCCCCCC AAACCACCGC AACCACAGAC 540
AGGAAGGACT CTACCCACTG TGCCCAGCTG CTGTTAGAGA AAGCTCTCCA CTCCTTCACC 600
CTGCTCGCCG CGCCTCCAGA GAAGGCCACG CCTATTCCAG AATGCCCCGC TCCCACCATC 660