EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08910

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr16:31934120-31934780

Target genes

Number: 13
Name	Ensembl ID

Dlg1	ENSMUSG00000022770
Mfi2	ENSMUSG00000022780
Gm15703	ENSMUSG00000083890
Ncbp2	ENSMUSG00000022774
Gm15696	ENSMUSG00000083853
Gm15694	ENSMUSG00000081404
Hmgb1	ENSMUSG00000080928
Senp5	ENSMUSG00000022772
Pak2	ENSMUSG00000022781
Pigx	ENSMUSG00000023791
1500031L02Rik	ENSMUSG00000035790
Lrrc33	ENSMUSG00000052384
Ubxn7	ENSMUSG00000053774

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF2	MA0051.1	chr16:31934582-31934600	GGAAAGTGAAATCAAGTC	+	6.54
Myod1	MA0499.1	chr16:31934255-31934268	CGCAGCTGTCCCC	+	6.57
Myog	MA0500.1	chr16:31934254-31934265	CCGCAGCTGTC	-	6.32

Enhancer Sequence

ACCGCTCGGG TGAGTCAGAC CCAGCCTGGG AAGAGTGGCT GGGGACGGGA TGAGGGCGCA 60
ATGGGGCAGG CAACGGTGTC CACCTTTATC TTTGCCCGGA GCCTGCAGTC CCGCAGGAGA 120
GCTGAGGCTC TCGCCCGCAG CTGTCCCCAA AATGCTCTCC AGGCTATAAG AGCAGTGACC 180
CGCAAGAATC TAGGGGGAGC CAGGGGGACT CATGATGGCA TTTTCCAAGG TTCTTTCCAA 240
ATGAGAGCGT TGGCTTCGGT CCCAAACAGA AAGGCCTAGG TTTTTGTCCT CTCCTGTTAC 300
CAGACTTGCC TAGGGAGCCG GGGCTCCTAG GCGATTCCAC AGACACACTG GGGTTCAGTG 360
TCTCCGTCTA TAACACAGCA GCAAGGTCCC ATAAATTTTA AAACGCGGCA AAGTGTGAGG 420
AAAGATGTCT ATGCACACTG AGTGATCCCC TAATTTTAGC CAGGAAAGTG AAATCAAGTC 480
TGCCTTTCCC GCTAGCAGTA TGAGACCCAG GGGTCCCATG AGGGCAAGGA CAAGAGAAAG 540
GGGACCCCGT GGGCCTGCAC AAAGCTTCTT TGTTGGTGGT CATGTAGGTC TTTGCAACAT 600
GCATCATCGT GGCAGGGACA GTTGCTGTTT TCTGTAAAGA GGAGGTCCTC CCCATGTCCT 660