EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08706

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr16:18585220-18586620

Target genes

Number: 20
Name	Ensembl ID

Dgcr6	ENSMUSG00000003531
Rtn4r	ENSMUSG00000043811
SNORA77	ENSMUSG00000080364
Trmt2a	ENSMUSG00000022721
Ranbp1	ENSMUSG00000005732
Dgcr8	ENSMUSG00000022718
D16H22S680E	ENSMUSG00000013539
Arvcf	ENSMUSG00000000325
Txnrd2	ENSMUSG00000075704
Comt	ENSMUSG00000000326
Gnb1l	ENSMUSG00000000884
Gm16314	ENSMUSG00000086965
Tbx1	ENSMUSG00000009097
Gp1bb	ENSMUSG00000050761
Sept5	ENSMUSG00000072214
Cldn5	ENSMUSG00000041378
Ufd1l	ENSMUSG00000005262
Cdc45	ENSMUSG00000000028
2510002D24Rik	ENSMUSG00000071632
Mrpl40	ENSMUSG00000022706

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF1	MA0486.2	chr16:18585525-18585538	TTCTGGAACTTTC	+	6.32
HSF2	MA0770.1	chr16:18585525-18585538	TTCTGGAACTTTC	+	6.39
HSF4	MA0771.1	chr16:18585525-18585538	TTCTGGAACTTTC	+	6.36

Enhancer Sequence

AACATTCGTC TGGGGATGGG GTAGGGAGGT CAGGTCCCTC AGGTAGGGGA GTACAGGAAC 60
ACTCTCCACT TTAACTTCTC TGGCCAGGCA GCCCCTAGCT CAGCCCTTCC TTCAGGTCTC 120
TCTTTAAGCT GCTTTCTTGG CTCTCTAATC TCAAGTAGGC CCTTATCCAA CCCTGGGCAA 180
GGCAGCAATA GGTCAGGCCT CAGGTCCCTT TCTGAAACAC AGAAATGGCT AACCAGGTGC 240
CCAGCTGCAG AATTCCAACG CCTGTTCTGA CTTCTTTGCT TACACAAACA GCCTTGCCCC 300
AGGAATTCTG GAACTTTCTG GACCTTGCCT CAGCCAGCAG CAGGATAACT AAGATATGGG 360
CCCCGGGACT TGTCTCCCCT TCTCAGAGCC TCCCTGGCTT CGTCCAACAA AGTGAAAGAA 420
TTCCCGGGTC CAACAAAGTG AAACCGGTGC AGTAGTGATC CCAAACATCC TCCCCCCAAG 480
TCACACGGAC ACCCCAGCAC TCCAGCCTTC AACTCTCAAG ACCTGGCCAG AGCCTCCCCA 540
AGAACCTGTT TGCAAAAGGC TCAGCGTATG TTTTCCTATT TCCTCCCTCT CCTCTAAATC 600
CCTCCAGTGA CATTCACGGC CCTCGTTTGC CTGCCCGGAC CAGAAGGCCA AGCCGCTGTT 660
GTCTTCAGGA GGCTGTGTTG GGTGGTATGG ACAGCTAAAG AGCCTGGAGA AAATCCACAG 720
AGCAGCAGCT AAGGACAGGC CTAAGTTCCC CAGGGAGGGC TGCACAGCAG GGAAACAGAA 780
ACCTCGAGAA GGCTTTGCAA ACAGGCCCTG AGCCTCCTTG GCCACGGAGC TGGTGTGTAC 840
ATTAGACACA ACCCAGCACC CGCCTTTGTC TACTGGTCAA ATCGGGAGCA TCTGCAATTG 900
TTCCTTTTTC CCTCTCGGCC CTGAAAACAA ATAACCAGGC ACTGGCACGG ATACCCTGCC 960
AGGCTTGTGA AGAACCGGGC CCACAAGCGG CCAAAATTGA GGCCCAGGAA AACCAGGTCT 1020
CGAGTTCCCG GAAAATGAGC GCAATGGCTT TTAAGGGTCT TAACTCTTTC CTAAAATTAT 1080
CCATACACCT AGGGGATGTT TGCTCTTTGG ATTGCCCTAC ATACTGAACG AAACCCACGC 1140
GGGAGTTTCC TAGGTGGCAG CTGCCTAACC GCCGCAGTCG GGCGCACATT CGGCCCAAAG 1200
ATTTCCCTCG AATTCGAAGA GTCCCAGGAC TCGCGGTTGG CGCTCCGCGG GTTGTCGCTG 1260
GAGCCGGGTC AGCAGAGAGG CCAGAAGGAC TCGCAGGTGG CCCCGCTGCA CCTTCATCCG 1320
CTTTTCAGCC GGGCTCCTGC GCATCCCTGA CACGCAGTCA GAGGCACAGA ACGCACGTGG 1380
ACAGGGGCGC GGGGAAGGGG 1400