EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08696

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr16:18381050-18382410

Target genes

Number: 28
Name	Ensembl ID

Smpd4	ENSMUSG00000005899
Klhl22	ENSMUSG00000022750
Dgcr2	ENSMUSG00000003166
Dgcr14	ENSMUSG00000003527
Slc25a1	ENSMUSG00000003528
Dgcr6	ENSMUSG00000003531
Gm15954	ENSMUSG00000089979
Prodh	ENSMUSG00000003526
Rtn4r	ENSMUSG00000043811
Zdhhc8	ENSMUSG00000060166
SNORA77	ENSMUSG00000080364
Trmt2a	ENSMUSG00000022721
Ranbp1	ENSMUSG00000005732
Dgcr8	ENSMUSG00000022718
D16H22S680E	ENSMUSG00000013539
Arvcf	ENSMUSG00000000325
Gm15764	ENSMUSG00000087556
Txnrd2	ENSMUSG00000075704
Comt	ENSMUSG00000000326
Gnb1l	ENSMUSG00000000884
Gm16314	ENSMUSG00000086965
Tbx1	ENSMUSG00000009097
Gp1bb	ENSMUSG00000050761
Sept5	ENSMUSG00000072214
Ufd1l	ENSMUSG00000005262
Cdc45	ENSMUSG00000000028
2510002D24Rik	ENSMUSG00000071632
Mrpl40	ENSMUSG00000022706

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr16:18382096-18382116	CCCCACCCCCACCCCAACCA	+	6.16
ZNF263	MA0528.1	chr16:18382229-18382250	CCCTCCCCCTCCCCCTTCCTA	-	6.1

Enhancer Sequence

GGTACTTTGA TCCTCATACC TACCTCAAAA TGAAGGGGGC AAGCTTAGTT TTGTGTCTGG 60
GACCTCAGTA CCTTGCTTCC TGTCTCTGTA AGATGCCAGG CCACTGGCAT GTAGCAATCA 120
GAGAAGACAG TAGAAGCAAT GGCTGGCCAC CTTCACTGCC TCACCCCATG CCTTGGGGTG 180
ACCTATGTAG CCTCTGTAAT TGGGTAGAGT GCACTGAGCA TCTTTGAGTA CATACGGGGA 240
ATATCCTGGA GGGACTTCTG CATCCCTTGG AGCATCCTTA GTAGCTCAGC AACATCTCCA 300
ACCAAACAGG GTTTGGCTCC ATTTTGGTCA GGGTGCATTA GACACCTGTG AGAGGACACA 360
TACTGGGGGA GCACCTGCTC GTGGCCTTTA GCCCTCAAGG TTGACACCAG CCAGCTACTT 420
GAAGTCCTCC TTGCTTCCTT AGAGACACTT TCGGAGCCTG CAAAGGCAGC ACCATTGTCT 480
GTAGCTGAGG TCTGCGTCAG ACACGGATGG GGTATCAGGG ACTGCCCCAA GTGGGAGACA 540
TCTATCTTCC ATGTCTAAGT CCTATGGAGA GATGAGTCTC ATGGAACACG GAGGCTTGAA 600
GGGAACCAAA TAGAGAACAG GTGTCTGCCC CCAGAGAAAT CTTGAGCCCA GGCTCTAGCA 660
GTAGCTTCCC GCGGACCAGG CCTCCTATAA AAGAGGACAC AGCTCCTGGA ATACTAATCC 720
GCCCACTTGC CCTTCAGCCC CCAAGAGTCA CCTTGAGTCA CCTGGCTCCT TGGCCACAGC 780
ATCATCCTGT CCTTGATTAG AGCCCCCAGT GTCTCAGTTC ACCCCTACTA TAACCTCTAA 840
TCTCCCTAGA TCTCTCAAAG GCCCTTTGCT CTGGGGCTGA CCTGTTTCCC TTGATCCTGG 900
ACAACCCTTG GCTTAAAGTG CCCCACTATT GTGAGGCAAG AACCCACTGA GGGTCCCCTT 960
ACATGTTGAG ATCCATTCTC TGAGGCCATG CTGTTGGGAC ACCATGGGCA TACCCTAGGA 1020
GACAGAAGTC CCTGAAGAAT GTGTCTCCCC ACCCCCACCC CAACCAGAGC CTTTGCCAGA 1080
ATGGTCTGCC TCTTTTGTGG GAAATCTAAT TTCCAGGCTG TATCTGATTG CAGGCTGCCT 1140
GAAAACCAGC TGCTTCCCTA GGCAGCGACG CATCCCTCGC CCTCCCCCTC CCCCTTCCTA 1200
AGCAGGCTTG GAGTCTTCAG TGCCTGGTTG GAAAGATGAC TGCCTCTCCC TTTCTCAGAG 1260
TTGTTTATAT CCATAATAAC TCTGCTTCTC ATATGTGCAA AACTGGAGCT GAGGAGCTCC 1320
AGCAGCAGCT GTGACCCCCA CCCCCACCCC CGGCTACGGC 1360