EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08678

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr16:18175640-18177450

Target genes

Number: 32
Name	Ensembl ID

Crkl	ENSMUSG00000006134
Lztr1	ENSMUSG00000022761
Smpd4	ENSMUSG00000005899
Med15	ENSMUSG00000012114
Klhl22	ENSMUSG00000022750
Scarf2	ENSMUSG00000012017
Car15	ENSMUSG00000090236
Gm20518	ENSMUSG00000092470
Dgcr2	ENSMUSG00000003166
Dgcr14	ENSMUSG00000003527
Slc25a1	ENSMUSG00000003528
Dgcr6	ENSMUSG00000003531
Gm15954	ENSMUSG00000089979
Prodh	ENSMUSG00000003526
Rtn4r	ENSMUSG00000043811
Zdhhc8	ENSMUSG00000060166
SNORA77	ENSMUSG00000080364
Trmt2a	ENSMUSG00000022721
Ranbp1	ENSMUSG00000005732
Dgcr8	ENSMUSG00000022718
D16H22S680E	ENSMUSG00000013539
Arvcf	ENSMUSG00000000325
Gm15764	ENSMUSG00000087556
Txnrd2	ENSMUSG00000075704
Comt	ENSMUSG00000000326
Gnb1l	ENSMUSG00000000884
Gm16314	ENSMUSG00000086965
Gp1bb	ENSMUSG00000050761
Sept5	ENSMUSG00000072214
Ufd1l	ENSMUSG00000005262
Cdc45	ENSMUSG00000000028
Mrpl40	ENSMUSG00000022706

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr16:18177018-18177033	AGGCTCAAGGCCAGC	+	6.57
ZNF263	MA0528.1	chr16:18175982-18176003	GGAAGAGGAAGGGAAGGAAGT	+	6.45

Enhancer Sequence

GCCAGGCATC CAGATGGACA GGGGCTGATA TAGATGGAGG ATACGGCTTG GGCTCTCTGA 60
AAACGTTTCT CTGGAGATCT TTCTCCCAAC CTCTGGCTCC AGCTGGCAAA ACTGAGTACT 120
TAGAACTATG ATTGGTCCCT GGGACCCCAA CACCAGAGCC AGACAAAGGA GTTCATCAGG 180
CAGGTTTCCT GGTTATCCAG TGGAGGGACC TGCAGACCCT CACAGACTTC AGGCATCATC 240
AGAACGTCCA GTGAGGCCAG GCAGGGGAAG ACTGTCCATT CTTACCCTCT GCCTCATTGG 300
CCTCACAGGC AGCTTAGGAG AAGAGGATTC CTACAAAGGT CAGGAAGAGG AAGGGAAGGA 360
AGTTACTTGA TCTATAGCCA GTGCATTCAC CAATGCCCAC AAGCTTCAGT CACAGAGCAC 420
TGGATGGTTG GCATTGCTGG CTGCCAGCTT CATGTGACCT GGACGGTTGC TGGACCCAAG 480
CTCTCTCGAG GGAGGCATGA GCCTGCTGGC TGGCTTGCAG AAGCTCCTGG CCACAAGCAG 540
AGGCTCAACC TTAAGGTTTT TCTCCTTGCA CCAGGCCAGA GCCTCCTGTG CAGAGAGACT 600
TTTAGTGGGC AGGGACAGGA AGACAGGGAC AGATGGTCTG TGGAAAGCAG GCATGGGGAA 660
GAGAACAGAG GCAAGCCAAG AAGTTCCTGT CCCCACCTTA TCCTAGAATG ATCAGAGCAG 720
CAGCTGTGGG ATTCCGCTGG GCCCGGGAAA CAAGCATCTG GATAAGCCAG CTGCAGTGCT 780
GGGGGCTCCT CAACCTATCG TCTACTGGAT ACACCCCCTT CCTGGGTTAG CTGACTCCAG 840
GCCCAGCCCC TGCTGCCTCC AGGCCTGCAG ATCCTTAGCT AGGCAGGAGA GGCCAAGATC 900
GATTAGCAGA GCAAACAGGC ATATTTACAG TTTGTGCTGT TTGCTTAGCC TCTGGGCCTC 960
CCAGCCCAGC CCACCTGCAA ACTCAGCCCA TCTCCCTGCA CTGAGCCCAC CAGGCATGGC 1020
CATGGCCAGC CCAGCCCAGA GGTTGTTAGG AAACGGTTAG TGCTGGGGAC TACCCTCCAC 1080
CTAGACTGAA GCCCAGGATC ACACAAAGCT GAGACAGGGG TCTCAGCTTT CCAGAACGGA 1140
GGGTTTGGGG TTGTAGCACA GCCCCCAGAT ACCACCCTCA TCCTCACTCA CAAAGCAACG 1200
AGGAGGGCAG GGATGTAGCT CAATTGGTGG AGTGATTGCC TAGTTCCTTC ACAAAGCCCT 1260
GAGGTAAGTT CCTCCCATCA CCAGGCATGG CTGTACATGT CTAGATGCCT AGCAATCACG 1320
AGGTAAAAGC ATCCTGCAAT ATATAACAAG CAGTAGATGT CATCCTCCAA TATAGGACAG 1380
GCTCAAGGCC AGCCTGGGAC ACATGATCTC ACACACACAC AAAAACACAC CAACAGCAGG 1440
GGGCAGGAGA GGAGTCCATC TGCCCTAATG TCTAGGCCAT GCTGGTTTTG TGGATGAAGA 1500
CATAAAAGAA AATAGACCAT CAGTTGGCAG CACGCACGCA CGCACACACA CACAAACATA 1560
CACACACACA CACACACACA CACACACACA CACACACACA CATTCTGCTC ATTCTGGCCA 1620
CAGACATCAG CATCAGTGCT CAGAGCCCAG GTGGTACAGG AGGCTCATGA CAAGATGGGC 1680
TATACCTGGA CAACCCTCAG TTCCCACCTG ACACTGCCCA GTCCCTGTCT TGAGTGGACA 1740
TGGGAGATGA ATACTCTTTT CCAGTGTCCA AAGCTACAGC TCCTAGCAAC TGCTTCAGGC 1800
CCCAGCCCTC 1810