EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08657

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr16:17801740-17802450

Target genes

Number: 22
Name	Ensembl ID

Crkl	ENSMUSG00000006134
Lztr1	ENSMUSG00000022761
Thap7	ENSMUSG00000022760
Smpd4	ENSMUSG00000005899
Ccdc74a	ENSMUSG00000041617
Rpl26	ENSMUSG00000059150
Med15	ENSMUSG00000012114
Klhl22	ENSMUSG00000022750
Scarf2	ENSMUSG00000012017
Car15	ENSMUSG00000090236
Gm20518	ENSMUSG00000092470
Dgcr2	ENSMUSG00000003166
Tssk1	ENSMUSG00000041566
Tssk2	ENSMUSG00000045521
Dgcr14	ENSMUSG00000003527
Slc25a1	ENSMUSG00000003528
Dgcr6	ENSMUSG00000003531
Rtn4r	ENSMUSG00000043811
Trmt2a	ENSMUSG00000022721
Ranbp1	ENSMUSG00000005732
Dgcr8	ENSMUSG00000022718
Comt	ENSMUSG00000000326

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFIA	MA0670.1	chr16:17801938-17801948	ACTTGGCACC	-	6.02
NR2F1	MA0017.2	chr16:17802117-17802130	CAGAGGTCATGAG	+	6.04

Enhancer Sequence

ATTTCGTGTA TATTGTAAGG TCAAAGAAAC ATAAGTAAAA CATTAAATAC CAGTAGGTAC 60
TCCACCCTCC CTGCCCCTGG AAAGCACTGG GCCTCAGTTT ACTTTCTTTA TGTCCCGGGA 120
AGGCTCCCAT ATGTGGTTCC CCTAGCCTAC AACAAGGGTC CCAGGTGCCT GCCTCCAGAG 180
GAACTATGCA GGGTCTACAC TTGGCACCAT CCCATCCCTC TCAGATGCTC TTCCACCCTG 240
GATTTTAGAC ACTCCCACCA TGGGTATCCA GGTGCCCCTT GGGACTGCCT GGCAGTGATG 300
CTGTCACAGC TATGTTACAT TTGGATCCCT GACACCCTTT TAGGCTGCTA GTCCTAAAAG 360
ACGTGCTAGA CCTGTCTCAG AGGTCATGAG AGTCATGTGG CTCCATGCTC CGGGTTCACT 420
GCTGCCCCTT CCTATTTCTT AACCTGTGGC TGATGGGATG GGGGAGCTGG AGTCCCTGTA 480
GATGACAATT CTTGGAGGCT GGCTCTTTGC CAGGTATGCA GATCAGGAGG TATGCACTTC 540
TGGAGGCAGA GACCGACCTG AGCCTTTCTC ACTCACAGTT GGGCCCCTCA CTTAACACTG 600
TCTGGCAGGC TTCAGGCTTG GGTATCCACC ACCTCCCTTA GGCTGGACAC CCTGAAGGCT 660
GGGGAAGGAA TGGGGTCGGG GGAGGGCATC AGGCTCAGAC GTCCCTCCTC 710