EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08640

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr16:17124250-17124490

Target genes

Number: 21
Name	Ensembl ID

Top3b	ENSMUSG00000022779
Vpreb1	ENSMUSG00000059305
Ppm1f	ENSMUSG00000026181
Mapk1	ENSMUSG00000063358
1700056N10Rik	ENSMUSG00000084792
Ypel1	ENSMUSG00000022773
Gm9974	ENSMUSG00000055497
Gm15585	ENSMUSG00000084881
Ppil2	ENSMUSG00000022771
2610318N02Rik	ENSMUSG00000049916
Sdf2l1	ENSMUSG00000022769
Ydjc	ENSMUSG00000041774
Ccdc116	ENSMUSG00000022768
Ube2l3	ENSMUSG00000038965
Rimbp3	ENSMUSG00000071636
Hic2	ENSMUSG00000050240
Tmem191c	ENSMUSG00000055692
Snap29	ENSMUSG00000022765
Pi4ka	ENSMUSG00000041720
Crkl	ENSMUSG00000006134
Lztr1	ENSMUSG00000022761

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr16:17124252-17124262	GGGGCGGGGC	-	6.02
NR2C2	MA0504.1	chr16:17124344-17124359	TGCCCTCTGACCCCA	-	6.95
Zfx	MA0146.2	chr16:17124321-17124335	GGAGCCTCGGCCTG	+	6.12

Enhancer Sequence

GTGGGGCGGG GCATGGGGAG TTGGGGTGGC TGGAGTGGGA TCTTAGACCT AGAACGCATG 60
CCCACCTGGG CGGAGCCTCG GCCTGAGCAA AGGATGCCCT CTGACCCCAG AGACACGGGC 120
CTGGCTACAA TCTCAAGTTT CCATGGAGAA GAGAGTAAAA TGAGCAGGGG GAGGGTACGG 180
CCTGCAGGCC TGAGGGGCCA GGCCTGGAAA GGGAAGAAAG AAGGAACAGT AGGTGAGGTG 240