EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08534

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr15:103163630-103166470

Target genes

Number: 15
Name	Ensembl ID

Hoxc11	ENSMUSG00000001656
Hoxc10	ENSMUSG00000022484
Hoxc8	ENSMUSG00000001657
Hoxc6	ENSMUSG00000001661
Hoxc5	ENSMUSG00000022485
Hoxc4	ENSMUSG00000075394
Smug1	ENSMUSG00000036061
Cbx5	ENSMUSG00000009575
Hnrnpa1	ENSMUSG00000046434
Nfe2	ENSMUSG00000058794
Copz1	ENSMUSG00000060992
Gpr84	ENSMUSG00000063234
Zfp385a	ENSMUSG00000000552
Itga5	ENSMUSG00000000555
Pde1b	ENSMUSG00000022489

TF binding sites/motifs

Number: 13

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr15:103165070-103165085	TGGCCTTTGAACTGT	-	6.4
INSM1	MA0155.1	chr15:103164681-103164693	TGCCCCCAGGCA	-	6.04
NFYA	MA0060.3	chr15:103164807-103164818	AGCCAATCAGA	+	6.32
NFYB	MA0502.1	chr15:103164802-103164817	GAATCAGCCAATCAG	+	7.23
NR2C2	MA0504.1	chr15:103164752-103164767	TGCCCTCTGCCCCCT	-	6.63
TFAP2A(var.2)	MA0810.1	chr15:103164681-103164693	TGCCCCCAGGCA	+	6.74
TFAP2A	MA0003.3	chr15:103164985-103164996	TGCCTGAGGCA	-	6.02
TFAP2B	MA0811.1	chr15:103164681-103164693	TGCCCCCAGGCA	+	6.11
ZNF263	MA0528.1	chr15:103164768-103164789	CCTTTACCATCCCCCTCCCCC	-	6.13
ZNF263	MA0528.1	chr15:103163859-103163880	CTTCCCCCTTCTGCATCCTCC	-	6.19
ZNF263	MA0528.1	chr15:103163862-103163883	CCCCCTTCTGCATCCTCCTTC	-	6.51
Zfx	MA0146.2	chr15:103164715-103164729	GGGGCCTGGGCCTG	+	6.73
Znf423	MA0116.1	chr15:103164706-103164721	GGCCCCCTAGGGGCC	-	6.57

Enhancer Sequence

GCCTGAAAGG CAGAGAAAAC ATTCTGTGGG GTAGGAAGAC TGAGCTTCGG AACCCCACCC 60
AAATACACAG TGCTACTCCC TAGCTGAGGC TCCCATACTC AGAAGTGTGC CCCCAGAGCG 120
TACACTTGTG TGAGCCATAT ATACACTTCC CTTGCTGCTG CTGCTCAAGG AGCAGATCCA 180
CTGTGGGCCT GGGGACAACA GGCTGGTCTT CCCTAGGGGG TGGTTTTCAC TTCCCCCTTC 240
TGCATCCTCC TTCCCCAAGC CCTTCAGGCT TTTTACAGAC CCAAGAAAGG CCTAGACCTC 300
CTCTGCAGAC AGCCTACCTC TGGATCTACT CAGAATCCTA GACTCCTTCC TCTGGTCTGG 360
AGTCCTTTGT GTGTCTGAAG GTTTGTTGCA TCCCCAGATC AGAGTCAAGT GGGTGACTTA 420
TTCCACTGTC CAGAGGTGGA CAGGGAAGCC TGGATTCAGA GAAAGCTGCT GTATCTGGCT 480
TCCTAAATTA CGATGCTGTT CAGGTCATAA TTCCTGAAAA ATTGTTGCCA CCTCTGGGTG 540
CCATTTGCTC TGATCCTTCT GTAGCCCCCT CATTCCCACC AGACCCCACT GTCTCAACCA 600
TGGGGCAGGC TCAGTTCCAG CTCTGCAAGA GGAACCGTAG CCACCGCCTC TGTGAGAGGA 660
GGGCTTGCAT GTGACCCCAA GGGGAAATGA AAGTTCAGCC AGCCATTCAG TACCACCCCA 720
CAAGTCTTCT CCTCCCCCTG GAGTCCTGGA GGAGGCTCCA CCAGGTTCTA AAGGACCCCG 780
CTTAAAGGAC TCAGGACCCT CAGGTTTTCC GCTGGTCCGG GGGGCTTCCT CCTGAAGCAG 840
TTGTTATCAA TCAGTTGGGC AATTCCTGCT ACCCTCTACT ACTTCAGCAC CCTCTGCCAG 900
CTGCAGGGGT TTCTGGCACA AAGGCCAGAC CAAGAGACTG CCTGCCTGGC CCTGGACCTC 960
CCTTGACCTT CTTAGGGTAA TGGGTCCCCA GGATCCTTTC TTGTTCCTCC ACTGACTCAC 1020
CCCTGTCATA CCTTCTGTAG CTGGCACTTG CTGCCCCCAG GCAGTGGCCT GGCCCTGGCC 1080
CCCTAGGGGC CTGGGCCTGA CAGCGTCCCC TTCCCTTGGT TCTGCCCTCT GCCCCCTTCC 1140
TTTACCATCC CCCTCCCCCA GCCCAGTCAG TAGAATCAGC CAATCAGAGT CCTGGAAAAG 1200
TGGGGCAGAG GGGAGGGCGG GGGAGCAGGG ATTAGGGGAA TCTGAGGAGA GAGGGAGGGG 1260
GTGGGGAGGG CTCAGGCACA GCTGGGGGTG GAGAATGAGG TCCAGAAAGG TCTGGAGGGG 1320
TTTCTTCCAC CCAATGCCAA CACTGGAGGC CAGTGTGCCT GAGGCAGACA GGGGTTAAGG 1380
CTGCTGGGAG CTTGGTTTCT AAATTCTAAG GCCTGAAGGA GAAGCTAGGA TGTTTGCCTT 1440
TGGCCTTTGA ACTGTTGGGA GCCTAGCATT GCCTTCACAT TTGGGATGGT GTGTGTGTGT 1500
GTGTGTGTGT GTGTGTGTGT GTGTGTGAGA GAGAGAGAGA GAAAGAGAGA GAGAGAGAGA 1560
CAGAGACAGA GAGACAGAGA GAGAGAGAGA GAGAAACAGA GAGACAGAGA GAGACAGAGA 1620
GAGAGACAGA GACAGACAGA GAGACAGAGA GAGACAGACA CACAGAGGGA GACAGAGAAG 1680
ACAGAAACAC AGAGAGACAG AATATGTGGG AAAGTGGCAA AGGCAGGAAT AGGTGACTAG 1740
AAATGGAACA GACACAGAAG AGGCTAAGGA TGGGAGAGTG GAAAAGGGAG TTTAAAACCT 1800
GACAGGCAGA ATGCAGAGCT AGATGAGGAC AGGAAGACCC TGGGGCAGAG ACCATAAGGT 1860
GAGAAAGATG AAGGTGAGGA CAGGGACAGA CAGACTGATC ATCTCCTCCT TCTGGTCTGT 1920
CCTCTCAGGC CTCTCCTCTG TGCCCCACCC TTTCTCACTG CCTGGCACAT CAGGGCAACC 1980
TTAACGAGCC TCAGGAATGG TGAGAGAAAC CTGAGTGCTC GCTCTCAGTG TCCCCTGCTC 2040
CCACTCCCAG CAGCTGGTTC AGGGCTGGCA CTTCCACCCC ACCACTTGGC TCCTTGACCT 2100
TGTCCCTGGC TGTCAACTCT CTAGGATCCC ACTCCCAAAT CCATTTTAGA GGAGGGAGAC 2160
AAGTTCCAGA AAAAGCCACA GAGAAACACT CAAAGAAGGT CTATGTACCA GGCAATGAGC 2220
CGGAGTCTTA TCTGATGCAA GATGGGAGAT GGGGCAGTCT GGGAAATGGC TTTGAGTCTG 2280
TGAAGTAGCC AGGATTATTT CTTCCACTCA GCATGTGAGG AGACTGGGAC TCAGAGAGGT 2340
TAAAAAACTT GGCTGATGCC ACACAGCCTT AAGTATCCAG GGCTGAGAAT CAAATCAGGA 2400
TCTGTCGCAC TCTAGCAAAT TCTTCCTCTG TTACATCGCT CCCAGAGGGC TCTCATTTAA 2460
CGCTGAATCG GAGGGCTGAG CACAGGCTCG CATCTGGTTT AAGCAGAGAA TGGGGAAAGC 2520
AATTCCTTGC TTTTCCTGGG TGTGGAGTCC TCATTTAGCT TTACAGGGGG AGAGATGGAG 2580
GAGAACAGAC AGAAGCCACT CAGCTCCCTG TAGCCTGGAA CGAATGTGGA ACAGGGTTGG 2640
GGTGAGAAGA GAGGTGGGAC AAAGGCATGA GATGAGGACA GAGTGAGGGG AGTCAGGGGG 2700
TGGGCAAGTG GTGAGGGACT ATCCCCGGAT TCTCATGGCT CTTCCACTCT GAAATCTGAG 2760
GTGGGAGAGG GGCAGATGGT ATCTTAAGAA TTGGGTGAGC AGAAACAGGG CTCTTCAGGG 2820
CTGGGGCTGA GGCTCAGTGG 2840