EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08524

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr15:103014420-103014950

Target genes

Number: 19
Name	Ensembl ID

Gm16258	ENSMUSG00000086903
Hoxc11	ENSMUSG00000001656
Hoxc10	ENSMUSG00000022484
Hoxc9	ENSMUSG00000036139
Hoxc8	ENSMUSG00000001657
Hoxc6	ENSMUSG00000001661
Hoxc5	ENSMUSG00000022485
Hoxc4	ENSMUSG00000075394
Smug1	ENSMUSG00000036061
Cbx5	ENSMUSG00000009575
Hnrnpa1	ENSMUSG00000046434
Nfe2	ENSMUSG00000058794
Copz1	ENSMUSG00000060992
Gpr84	ENSMUSG00000063234
Zfp385a	ENSMUSG00000000552
Itga5	ENSMUSG00000000555
BC048502	ENSMUSG00000053508
Nckap1l	ENSMUSG00000022488
Pde1b	ENSMUSG00000022489

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr15:103014537-103014556	TCGCGCCACCTTCTGGGCA	-	6.07
EWSR1-FLI1	MA0149.1	chr15:103014920-103014938	CCTGACTGCCTTCCTGCC	-	6.1

Enhancer Sequence

CCAGCTGTGC TCGGCTGCCT TTGGCTGCAT GCCTTCATTT GGCAGTGGGT GGGCTGCACG 60
CAGGGCGAGT GAGACCCATG GAGCGGGCCA CCTCTGTGCT TGACCGCTGT CGCCGGCTCG 120
CGCCACCTTC TGGGCATCTC TTTGCATCCT CCAGCCGCAG ACCGAGGTCC ACAACCGGGA 180
TTAGACACCA CCACCTCCTA GTCTTCCAGG ACCACTTAGA CTCCTTCCTA GTCCAACCTT 240
CCTGAAGGAC TGGTGAAGTC TGGTATCCTG CTGAAATGCA GTGTATGTGA TTGGGGTGCC 300
CCAAAACTCT GGAAACTCCC CGAATTTCAG GCAAAGATTA TGATGTATGC TCTGGTTAAG 360
AACATCCTTC GACTTCTGCC AGCAGCTCCA TGTAGCTTGA TCTCTTACAT CTGGGCCAGG 420
CTTGTGCCCA CTGGCCTTCT GTCAGAGGAC TGCAGCCTCT GGACTGCCCT CACTCCGCTC 480
ATGAGCTGTT GCCTTCCTAC CCTGACTGCC TTCCTGCCCT CTTGTCTCCC 530