EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08511

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr15:102565340-102566860

Target genes

Number: 21
Name	Ensembl ID

Zfp740	ENSMUSG00000046897
Rarg	ENSMUSG00000001288
Mfsd5	ENSMUSG00000045665
Espl1	ENSMUSG00000058290
Pfdn5	ENSMUSG00000001289
Myg1	ENSMUSG00000001285
Aaas	ENSMUSG00000036678
Prr13	ENSMUSG00000023048
Pcbp2	ENSMUSG00000056851
Gm10337	ENSMUSG00000071586
Map3k12	ENSMUSG00000023050
Tarbp2	ENSMUSG00000023051
Gm15430	ENSMUSG00000036305
Atp5g2	ENSMUSG00000062683
Calcoco1	ENSMUSG00000023055
Hoxc12	ENSMUSG00000050328
Gm16258	ENSMUSG00000086903
Hoxc11	ENSMUSG00000001656
Hoxc10	ENSMUSG00000022484
Hoxc8	ENSMUSG00000001657
Hoxc4	ENSMUSG00000075394

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Alx1	MA0854.1	chr15:102565644-102565661	TCTAATTAATTAGTGCT	-	6.05
Zfx	MA0146.2	chr15:102566842-102566856	GCAGCCGAGGCCTC	+	6
mix-a	MA0621.1	chr15:102565647-102565658	AATTAATTAGT	+	6.62

Enhancer Sequence

AAATTTTTAA AAATTTTCAC TCTTTCTCCA TCATCATGTA CTTGGTCGGC CTCCCAAGAT 60
TCAACTTTCT GAACCCAGTC TTCACCCTCT TTCCAGCTTC CTGTTCCAGA AGGCAGCACA 120
AGAAAGAGCT GGGGGGCGCT GGGGGCTCTG GGGTGTCCAC AGTGAGCCCA GTGTCACCAG 180
GAGCCGTGAT TAGCCGAGCT GCTGGCTGTG TAATTGGCGT GTGCCTGCGT CCCCGGGGTC 240
TGGTGTGTTA ACAGCGGGTC CCTGTGGTGA GTAACGAGAT CTGGGCCCAT GGCTGGTTGC 300
ACACTCTAAT TAATTAGTGC TCCTCTGGTG TGGAGGAATG AGAAGAGGCT GAGGGAGGCC 360
ACGTGGGGGC GCCTCAAAGT GAGAGCCCAG CTCTTCAGAG CTCTGAGGTC CCTGAGGTCT 420
GAGGGACCGC AAGCATCCAC CCCAGAGTGA GGGATTCGGT GGGAATGAAC TGGGTACAGA 480
CTGGCCATGC GCTGGTGGCC CATGCTTGGC GCAAGTGTCT ACCCTCAGCT AAATCCCAGA 540
CTCAAGCCTT TGCTACAAAT CTTTCTCGGG AAACCCAGAA ATATGTGGAG GACCAAGGCT 600
TCCTGTCCCT TCAGCCTCAT TCTTGTCCGT TCACAGCTGC CTCCATTCTG CAAGATGGTT 660
CTCCACCAGC CATTGACAAC TGCCTCACAC TCAAGGACCC TCACCTTCTG GGCACTGCCT 720
GTCCCTGCAC ATGTGGACTC TCTGCTTTTG GAGTAGCTTT CTAGTCCAGA AGCCTTTCCC 780
TCAGCCCTGG TGTGGATTGC CTCCAGAGCT TGCTCATGCT AGGCGACCAT AACTGGTCTA 840
CAGCAGCAGC CTGTAGATTA TAGGACAAGT TCTCACCATG CGGCCCAGCC AGGCTTTGAG 900
CTCTACATTC TCCTGCTTGA GTCTCCCAAC TGCACCACCA TGTCTGGCTA GTCTCTTTTG 960
AAACCTGGCA CCTGGAAGGA ATACAACAGA AACTTCAAGC AGAGAGCAGG GAGAAGGTTC 1020
GGGGAGCGTC CTCCTCCCCA CGGTCTTACT CTTACAGTAT GATTATGATT ATTATAGCAG 1080
CAAGAAAAAT TAAGTCGAGA AGTGAGAAAG AACTTCCAGA AAGCAGAAAG GCTCTATTTG 1140
TCTGCTGAGG CAGAAATCTA TGCCTGCCCG ACCCCTCGAG GAGATCTAGG GGTGACCAAG 1200
CACCCCTTCC CATCCCCCTC ACAGAGCTTT TCCTTTAGCG CTGAAATCAA GCAAGGTGTG 1260
TGGGGCGGGG AGAGTGGGGA GGGAAACTAG CGAAAATCCG CAGAATTGGA GATGAGGCTG 1320
CGGCAGGCGC TCTGCCTTCC ATGTGGCGGC ACGAACCCCG TTCTCGCGCC CGGTAATTGC 1380
TAAATTACCA GCCATCTGCT CGGCTCTCAG ACATAAATTA TCTGCGAGGA GAAAAGCCAC 1440
AGAGGCGGTG TACTTTCCTC CCGCCCTCCC AAACTCGCGA GAGGAGCTTA GGGTGGGCTC 1500
AGGCAGCCGA GGCCTCAGTC 1520