EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08410

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr15:98764300-98764760

Target genes

Number: 20
Name	Ensembl ID

2310037I24Rik	ENSMUSG00000022992
Ccnt1	ENSMUSG00000011960
Adcy6	ENSMUSG00000022994
Ddx23	ENSMUSG00000003360
Rnd1	ENSMUSG00000054855
Ccdc65	ENSMUSG00000003354
Fkbp11	ENSMUSG00000003355
Arf3	ENSMUSG00000051853
Prkag1	ENSMUSG00000067713
Rhebl1	ENSMUSG00000023755
Dhh	ENSMUSG00000023000
Lmbr1l	ENSMUSG00000022999
Tuba1a	ENSMUSG00000072235
Troap	ENSMUSG00000032783
Spats2	ENSMUSG00000051934
SNORA40	ENSMUSG00000088377
Mcrs1	ENSMUSG00000037570
Prpf40b	ENSMUSG00000023007
Fmnl3	ENSMUSG00000023008
Tmbim6	ENSMUSG00000023010

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr15:98764427-98764438	CCTTCCCGCCC	-	6.62
NRF1	MA0506.1	chr15:98764403-98764414	TGCGCATGCGC	-	6.32
ZNF263	MA0528.1	chr15:98764717-98764738	CCTCCCCTCCATCACTCCTCC	-	6.25

Enhancer Sequence

CAACTGGAGA CACACCCTAA ACGAATTAAA CCCGCAGCGT CTCAGCGCGC ACGCGCACAC 60
TGCGGAGGCT GTTCCCGCCG CTCTCAGGCG GGAATGTAAC GGTTGCGCAT GCGCCTTGTG 120
TCCGGCGCCT TCCCGCCCCC GCCTTTTCGC AGGATAGAGA AAGTGAGGGC GGGGAAAATC 180
TGCGCGCGTG CCCGAAAAGC AGCAAGCAAG GGAAGGATGG GGGAAGGGCC CGAGCGGGAA 240
GAGTGCAATC TGAACGCGCC ATGCTGCACG TTCCGTGCAG GGTGTGATAA TTGGAGACCG 300
GGTTCCAGTA AGATCCGAGT GCGCCCCTTT TCCCCAAACC AGGGACGCCC CCAGCAGCAT 360
GGGCCCCAAG CTTTCTCGCA CTCGCCCCCC TCGATCACAG CCCCGAGCGA GCTTCTTCCT 420
CCCCTCCATC ACTCCTCCGC CCCACACACC GATCCCCACT 460