EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-08288

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr15:89025360-89026640

Target genes

Number: 22
Name	Ensembl ID

Brd1	ENSMUSG00000022387
Creld2	ENSMUSG00000023272
Pim3	ENSMUSG00000035828
RP23	ENSMUSG00000093394
Panx2	ENSMUSG00000058441
Trabd	ENSMUSG00000015363
1810021B22Rik	ENSMUSG00000087331
1300018J18Rik	ENSMUSG00000035757
Tubgcp6	ENSMUSG00000051786
Hdac10	ENSMUSG00000062906
Mapk12	ENSMUSG00000022610
Mapk11	ENSMUSG00000053137
Plxnb2	ENSMUSG00000036606
Fam116b	ENSMUSG00000015377
Ppp6r2	ENSMUSG00000036561
Sbf1	ENSMUSG00000036529
Ncaph2	ENSMUSG00000008690
C730034F03Rik	ENSMUSG00000079242
Chkb	ENSMUSG00000022617
Mapk8ip2	ENSMUSG00000022619
Arsa	ENSMUSG00000022620
Rabl2	ENSMUSG00000022621

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr15:89025616-89025634	CTTTCATTCTTTCCTTTC	-	6.03
IRF1	MA0050.2	chr15:89025624-89025645	CTTTCCTTTCTCTTTCTTTCA	+	6.03
ZNF263	MA0528.1	chr15:89026515-89026536	AAGGGAGGAGCGTGAGGGGGA	+	6
ZNF263	MA0528.1	chr15:89026518-89026539	GGAGGAGCGTGAGGGGGAGGG	+	7.79

Enhancer Sequence

TCTTACGGAT GGTTGTGAGC CACCATGTGG TTGCTGGGAC TTGAACTCAG GACCTTCAGA 60
AGAGCAGTCG GGTGCTCTTA CCCGTTGAGC CATCTCACCA GCCCCCTCCC TTTTTTTTAA 120
AAGACAAAGT CTCACTATGT AGCCTTGGCT TGCCTGCTCC AGGTTGGCCT TGAGCATAGA 180
GATCAGCCTG CTTTTGCCTC CAGAGTACTA GATTAAAGAA AGACATGTGC CACAATGTGT 240
TCTCTCTCTC CCCTCTCTTT CATTCTTTCC TTTCTCTTTC TTTCAACAAG GTCTGATTCT 300
ATAGCTCAGG CTCCTTTGGG ACTCTATCAA TCCAGACTAG CTTCAAACTA ATCATCTTGC 360
TTCACCAACC TCCCATCCCC CACCCAGTCC CCGAAATGCT GGGTTTGCGC GCACTACTAT 420
GCCTGGCTGA TATTTTCATC TTATCTAGTA GAAGAGAAGC TGCCTTTCTT TGTAGGTGGG 480
TAAGGGGGAT GGAGGCCTTC AGACCACAGA AAGACCACAT CAAAAGCCTA AGACCCTGCC 540
CAGCTGCTCA CAGCTGGTGA CCAGATGCCA AAGGTTGAGA AGAGCTCAAG ACACAGGAAC 600
CAAGCAGGGC CTCACAGGGT CTGGATCTGA TTCTAATTGA AAGACAAGAG GAATGCCAGA 660
AGCGAACTAC CAGTGACACT GAAGACTGCA GCAGACCCAG TGTGAGACCT GGGGGCGGTG 720
GCGGGGGCAA GGTGGGGGGA ACCCTAGGAC TCTGGCTTGA GCAACCAAGG GGCTGGAGAT 780
ATGTTTGCCT CTTTGGAGAA AGGTCCATGT TAGATGCTGC GTAGGATACA TTGATGGACA 840
GGCAGTCAGG CTTTACAGAT CTTTCCTTCC TTGGCCTGGG AAGGGTTTCT AGAGCTCTGA 900
GGAAGAGGCT CCTCTTGGAG AGGTGACAGG CAATAGGAAA GAGGAGGTCT CTAAGCTAGT 960
CACTAGCCGA AGGAAGTGGG GGAAAGGTCA GCCTGAGGGT GCAAAATATT CCGAGAGGCT 1020
CCTAAGAAGA CCCTAGACCA AGCAGGAAGG CTACAGGCGA AAAGTCCTGC TTCCTGGAGG 1080
GTGGGCGCCC CGGGTAGAGA AACCGCGCGG CGGCTTAGAG GAATGGGAGG AAAGAAGCAG 1140
GGGTGCAGGC GAGAGAAGGG AGGAGCGTGA GGGGGAGGGG CATCGGGAGA GGAGGGACGT 1200
CCGGAGAGGA GGGGCCTCTG GAGAGGTTCA GGCCGCCGAA GGAGAGGTAC TAAGACAGTT 1260
CTGGAGGGTC AGCCAGCCCA 1280