EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-06090

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr13:55857130-55858890

Target genes

Number: 23
Name	Ensembl ID

Nsd1	ENSMUSG00000021488
Rab24	ENSMUSG00000034789
Prelid1	ENSMUSG00000021486
Mxd3	ENSMUSG00000021485
Lman2	ENSMUSG00000021484
Grk6	ENSMUSG00000074886
Prr7	ENSMUSG00000034686
Dbn1	ENSMUSG00000034675
Pdlim7	ENSMUSG00000021493
Dok3	ENSMUSG00000035711
Ddx41	ENSMUSG00000021494
Fam193b	ENSMUSG00000021495
Tmed9	ENSMUSG00000058569
B4galt7	ENSMUSG00000021504
Caml	ENSMUSG00000021501
Ddx46	ENSMUSG00000021500
B230219D22Rik	ENSMUSG00000045767
Txndc15	ENSMUSG00000021497
Pcbd2	ENSMUSG00000021496
4930451E10Rik	ENSMUSG00000069223
Catsper3	ENSMUSG00000021499
Pitx1	ENSMUSG00000021506
H2afy	ENSMUSG00000015937

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PRDM1	MA0508.2	chr13:55858076-55858086	GTGAAAGTGA	-	6.02
SOX10	MA0442.2	chr13:55857958-55857969	AAAACAAAGAA	+	6.62

Enhancer Sequence

TTTATTACTA ACTCATAAAG TTACAAGTGG CAAAAGAAAG CCATTGCACT CCCAAAATCT 60
ATTTAACTTT AATTTTTTAA GCGTTTTAAT AAAGTAAGGC CTACTTTCCC ATCCAAAATG 120
TAGAAATTTT ACTGGAATGA AATAGTGCAA CCACTGGCTG CATTACAACG GCCTTCATTT 180
TTCTTGTCGT CAGATTTCTG AGCAGATTTT TTTCTTAAGT CCGTTAGTGT AAAGAAAAAA 240
AAATTTTTTT GACCATGTTT ACTGTTTAAA GAAATGCTCA ACAGTATTAA AATTTGAGAG 300
AAAACTCCAA CTGGAGACCG AGTATACCTG ATTTTTATTA GATTTTATTT GTTGTTTGTG 360
TGCATGTGTG TGCAACCGAG TGTTTGCATT CCTGCACACA TGCCAGGGTG TATGTGTGGG 420
GGCTGGAGAA CAACTGTGGC AGTCAGTTAC CCCTCCCACC TTGGGTCCTA GGGATCTAAC 480
TGAGGTCTTT GGGCTTGGTA GCAAGCACCT TTCCCCGATG AGCCGTCTCT CCATCACACC 540
CCCGTGTCTC TTTTAACCTT AAAAATTTAA CCTTAAAATG ATGATTTAGC GATATCAGAC 600
TGGACCAGTC ACTTTATTAA AATCTTATAT TAATGCAGCC ATTTTCTTAA TTTCAAGTTT 660
TTGTTGGGTT TTAAATTAAT TCTAGGATCA TGAGGGTTTT ACACTTACGA CTTGTGTACC 720
CGTGTCTGTG TGTGGGGAGT CTCCTGGGAA GGAAGGCACT TGGGAGGCCT CTTTTAGGGA 780
AACCTGAGGC AGTGAGGAGA AAGAATGATG TAGAACAACC CAGTCTTCAA AACAAAGAAA 840
AACCCCAAGT GGAGAAAAAT GCTGTGGGGC AGCAACCATC AGGTGTAAGC AGACTCTAGG 900
CCTTCAGCGC TAAGTGCATC CGTGGGAGGC TCAGCCCTCA GCCTGCGTGA AAGTGAAATA 960
TCCTCAGAGC GCCAGACTCT GGAGAGAATG AAGCAGACAC AGGCAGGCGG GCAGTGACTG 1020
GGGCTGGCCT CACAGGCTTT GAAACTGAGA AAAGTTGGAC ACTCGACTAC CTTAAAGTTT 1080
TACTAGTGCT TGTAAAACAG TTCTGAGGTT TCGGAGGTCC CAATCAGCCC CGTAAGCCAG 1140
ACGGAGGACT CAAGATTCTC TCCCAGCTAC CCTGGAAGCA AACGCTTGTT TCCTGAACAG 1200
TGTGGGCTGA GTTATGGAGG AGGCCCCTCC CCCTTCCCGG TCTAGGAGAA GAACTCACCA 1260
GGGAACAGAG CCCCCAGGGT TTCAAGAAGA GTACACCCCA GCACACCAAG CACAGGGTGC 1320
TTGTGTAGGA TCAGCCTAAC GGGGAGAGGA GGTGCTGGTC TCACTATGAA GACTTAGACA 1380
CGTGTTATAG CACTGTGTCT TCTGAGCACA GGACAGACAG ACAGACGTAA GCCACTTTTG 1440
TGTCCTGTCT CCTCACTTCC ACAGCGTCCT CTGTCGTCCT CTGTGAGCTG TTCTCTTATA 1500
GGCTAGTGCA TGGGCAGAGT GTGGGTTGGG GAGGGGCCGT GTCCACAATC CACGTTATTT 1560
GGAAATACTG TGAGCACAAG AGCGCGGTCC CCTGAGAAGC CCGCTTCAGG AAGGAGAGGA 1620
GCATGTCTGT GCATTGTGTG CTGCCTGCAC ATGGAGCGTG CGGCTAGTGC TGTCACTAGT 1680
TCAAATTGGT GGGGTATCTG CTCGAGGAAT ATTAGAAACT GAGAAATAAT TGTCATTTTG 1740
GCACAGTTGA CCGCTATCAC 1760