EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-05532

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr12:113047570-113047960

Target genes

Number: 16
Name	Ensembl ID

Tnfaip2	ENSMUSG00000021281
Gm266	ENSMUSG00000010529
Eif5	ENSMUSG00000021282
Snora28	ENSMUSG00000064493
Mark3	ENSMUSG00000007411
Ckb	ENSMUSG00000001270
Trmt61a	ENSMUSG00000060950
Bag5	ENSMUSG00000049792
2810002N01Rik	ENSMUSG00000037787
Gm15995	ENSMUSG00000090193
Gm15996	ENSMUSG00000090026
Klc1	ENSMUSG00000021288
Xrcc3	ENSMUSG00000021287
Zfyve21	ENSMUSG00000021286
Ppp1r13b	ENSMUSG00000021285
2010107E04Rik	ENSMUSG00000021290

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx2-5(var.2)

MA0503.1

chr12:113047841-113047852

AACCACTCAAG

6.32

Enhancer Sequence

AGCCATGGCT TGTTTTGCAG CTATGACCAT CAGCCCTTAG AGGGCCCAGG CAGAGTCTCC 60
CAGTACCAAA ACCATCCACA CGCTGCTCAA CTACTGGCCA GACCAGAAGG GAAAGGCCTC 120
GTGCTCTGCC CTACCTGTCT GGTTCTGTGA GTCTGGGTGC AGGGGTGTGT AGTAACTGTA 180
GGCCCAGCTA GCACCCCCTG CTTCCCCCTG CCAGCCTAGC ACAGCTCCAC CTCCCACTCA 240
CTCTTCTGGA AGAAGAAAGA CATATAGGGG AAACCACTCA AGAGATAGCC ACTGGCTCCC 300
AGAGAGGAAA GCAGCTCTCA GAGCAGGCCA GGGATCAGCT CTACCTGCCT CAGATCCTGC 360
CTCCCCTCCC TTCAGGAAGG GGAGCCACTT 390