EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-05335

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr12:103935140-103938150

Target genes

Number: 8
Name	Ensembl ID

Lgmn	ENSMUSG00000021190
Golga5	ENSMUSG00000021192
Itpk1	ENSMUSG00000057963
D230037D09Rik	ENSMUSG00000046675
Ubr7	ENSMUSG00000041712
Moap1	ENSMUSG00000091931
AK010878	ENSMUSG00000041716
Btbd7	ENSMUSG00000041702

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF2	MA0051.1	chr12:103936841-103936859	GTCTTGGTTTCACTCTCC	-	6.31
NR2C2	MA0504.1	chr12:103937410-103937425	TGACCTCTGACCTGT	-	7.58
Nr2f6	MA0677.1	chr12:103937410-103937424	TGACCTCTGACCTG	-	6.67
RREB1	MA0073.1	chr12:103936210-103936230	TGTGTGTGTGTGTTGGGGGG	-	6.69
RREB1	MA0073.1	chr12:103936208-103936228	TGTGTGTGTGTGTGTTGGGG	-	7.29
RXRB	MA0855.1	chr12:103937410-103937424	TGACCTCTGACCTG	-	6.1
RXRG	MA0856.1	chr12:103937410-103937424	TGACCTCTGACCTG	-	6.38
Rxra	MA0512.2	chr12:103937410-103937424	TGACCTCTGACCTG	-	6.27
Sox3	MA0514.1	chr12:103937049-103937059	AAAACAAAGG	-	6.02
ZNF263	MA0528.1	chr12:103935936-103935957	TTATCCCTTCCTCCTTCCTCC	-	6.03
ZNF263	MA0528.1	chr12:103937269-103937290	TCCTTCTCACCCCCCACCCCC	-	6.13
ZNF263	MA0528.1	chr12:103935939-103935960	TCCCTTCCTCCTTCCTCCTTC	-	7.6

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_07179	chr12:103934367-103936495	Intestine
mSE_07179	chr12:103936556-103938862	Intestine

Enhancer Sequence

TCACCTTCTG GGATGGCTGG GTGAAGATGA AGATAGATGC GTGTCTGGCC AAGAGCCCAG 60
GTCTTTCGCT GGGACGCAAG CTGACACGCA CAGGTCAGTA GCGAACTAAT GACTACCCAA 120
AAAAGCACAA GCATCAATTG GGTTTTCTAC CAACCCCAGG CTCCGGGCAG GGACAGCTGG 180
CCCGGAGCAC ACTCATGTCA CCTGCCCTGG GTCCACAGTT CCTGACTTCC TGAACACAGA 240
GGCAGAACTG AGCCAGGCAA GGGGGGAGCA TGCCTCCTCC TGTCCTTGGC CCCCAGAGCA 300
TGGCGGATGA ACCAGAGTTC CTTTGGCTGG TAGGAAGGCC ACATGGCCAT CCACATGGCC 360
TCCATCACAC TTCCAAGGAA CAGGCTCTGG ATGTGGACAC CCACCTGCAA TTATACCCAA 420
AGCTGCCTGC CCCTTCCTAG ACGGCTACCT TCAGTGAAGT GGAACTCGGG GCTGTGACGG 480
AGGCTCTGCA CTCCCACGCA GGGGACTCTG CCCACTCTGT GGGTCCTTCA GCATTTCCAG 540
GGAGTGCTCA ACCCCTCTCA GTAAATAAAT ACCACCTCCC CCGAGAGACC TCTGTCCAGA 600
GCTCTGAGCA GCCTCAGCTA CACCAGCACA ACCCTCTCCA GGTTTCGAGC AACCAGGCTC 660
CTTGCACCTT GCAGTGTGCG TGATGTGCAG GCCTACTGGT TCACCTTCCC TTTCACAGGC 720
ACTAGCAGAG AAAGAACAGA ACCCAGCACT GGGGACTGGG CAGATGCTGA GGCATTGAAC 780
GAGGCAAAGC TAAGACTTAT CCCTTCCTCC TTCCTCCTTC CACCTCAGGT GCTTCTCCCC 840
TGACCCAGAG GACTTCAGGG TCACGAGGAA CTTTGGCTGA GCCAGAGATG AACAGAGGCT 900
TCTGAAAGCA CCAGGCAGCT CCTTGACCCT ACCACATATG CTTTCGAGTA CCTATGTCTG 960
TTGTGTGTTG TAGGTATCTA CACTCCAAAT CTCTCCCGTC AAGGAGCCCA TTTTTTAAAG 1020
AGAGAGGACG CAAAGCAGAA TAACAAAGAA AAGACAAGCC TAGCAGTGTG TGTGTGTGTG 1080
TGTTGGGGGG GGGGTGTCTC AGAACATCAC TGAGAAGCTC TTGGGGGAAG GCCTTTGGCC 1140
TGTGTATCCT GATTCACCCT CCAGGGACCA CTGGTGACTT AGCAGAGTCC ATTAGGTGTG 1200
CCCTGGGACA CTCTGAGCAG TTTACAGGGT GGGGCACCCA GCATGCACAG GCTTGGAGGG 1260
GGAGGTGCTG AGGCAGGAGT CTTGTAGGGG TTCCCTCCTG GGAGTGATTC TCAAATCCTC 1320
ACATATCTGG AGACAGATCC ACCCTAGTGA ACCTTAAAAA CAGGTGGTGG GAGGGCACAG 1380
TGGGGTGGGG GAGGGGACAT CACAGGCTTC GGCTTGGCAC CATAAGGGGC CCAGACACCA 1440
GCCTGTGAGG CCCTGCTGGG GAGATGCAGG CCACAAAGGC TGCTTTCTGA GAAGGCTCAG 1500
AGCAGGCAAG ACAAAGCCCC AGACAGATTC AAATAGCCCA ATGGGAATGG CCAGACCTGC 1560
TCCAATACAA TCATGCCCTC ACTCACAGCT CCCAGAAAGG GCCTGTTCCC TGGGAGACTT 1620
TAGTTCCAGC TGTTAGGAGG GGGCTCAGAC CTTAGATCAG GATCTACTGT GTGACCTCAT 1680
ACCAGCCTCT TCACCCAGGA GGTCTTGGTT TCACTCTCCC ATACCTTCCC CAAAGCTGGC 1740
TCTCCAGGAG CCCTGGAGGG GGAAGGCTGC GGTAAACCCA GTTCAAGCAG AAAGGAAGAC 1800
CCTTGAAACA TAGGCCTTCT GGTGAAGGGC CTGCTTTCTA AATCCAATAT TACTTTTGAA 1860
AAGGGTGTGC CTAAGCGTTC TCTCAGAAGC TAGTTTACCA AAGTGAACAA AAACAAAGGT 1920
TCTCCTTATA TCCTACCAGT CAGAGACCAC ATCTCAAAGT CTCCACTGAG TGCCCGAAAC 1980
CTGCTAATTC ACTGAGAGGA ACAACTAGGG GAGCCTGGGA TGCTTGATGA TTAGGAATGG 2040
AGCCAGCAGG GTCATGGGCC CAGCCGTGTC TGGTACCTGC AGAACCCCCT CAGTCTCACT 2100
ATGCTGAAAA GAAATGCAAA CCAGGGCATT CCTTCTCACC CCCCACCCCC CATCTGGCCA 2160
GTGCCTAGCA CTGTGTGCTG AACATGTGGG TTGTAGCTCC TGCCACCCTG TCACCCTCTG 2220
AAACTGCAAC AGTAAAACTG TTTCAGAACT GCCAGGAAAA AGAATGTCTG TGACCTCTGA 2280
CCTGTCAATA TACATCCAGG CAAGGGATGG GGCACCCACT GTCAAACTGT CTAGAAGGTA 2340
ACCTCAGAAG AAGAAAAAGT CTCCATCCTT TCAAGAGCTG AACCACACTG CATATACACA 2400
GACAGACAGA CAGACACACA CACACACACA TACAATGATG CAGAAGCCCC AAAGGAAGCA 2460
GCAATGTGGA ATTTCCCCAA GATATACAAC CCCATGCATA AAGTGCCACT GTAAGAGCAG 2520
GGACAGGCTG CAGGCTCCCC CTTGGTCACA TCAACGCCCA TGGAGACAGC CTGCTGAGTT 2580
CCCTGAGCAG CTGAGCTCAG GGCCAAGAAG GGACAAGCTG GCTTTTCATT ATGTGCTTTG 2640
GGCCCTCTGA ATTTTGCATC ATGTGCCTGT ATTTTAAGAG GGGTGTGGGG AGGGGGGTCT 2700
TGGTGGTGCA CACCTTAGAT CTCAGCACTT AGAAGCAGAG ACAGACAGGT CTCTGTAAGT 2760
TAGAGGCCAG CCTGAACTAC AAAGCAAATT CTAAGTCAGA CAGGGCTACA TAACCCAGGA 2820
TGGCTCTGAA CACTGTGTAG CCAACCTTGA ACCTCTGGCC ATCCTGCCTC CACCTCGAGA 2880
CCGCTGCAGT TGTGGGAGTG TGCACCACCA CACCCAGGTT TTATGTGGTG CAGATCAGCC 2940
CCAGGTGCTG GCTCATGCAC GCTAGGTAAG CATTCTACCG GCTGAGCTTC ATCTCAAGCC 3000
CGAAATATGT 3010