EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-05292

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr12:100566240-100570210

Target genes

Number: 5
Name	Ensembl ID

Rpl30	ENSMUSG00000062582
Gm19898	ENSMUSG00000093419
RP23	ENSMUSG00000093465
3300002A11Rik	ENSMUSG00000033731
Foxn3	ENSMUSG00000033713

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F7	MA0758.1	chr12:100568530-100568544	GTTTCCCTCCAAAT	+	6.01
KLF5	MA0599.1	chr12:100567849-100567859	GGGGCGGGGC	-	6.02
LEF1	MA0768.1	chr12:100567549-100567564	CAACATCAAAGAGTT	+	6.01
Mecom	MA0029.1	chr12:100569969-100569983	AAGATAAGATTAGA	+	6.45
ZNF263	MA0528.1	chr12:100569686-100569707	AAAGGTGGGGGAGGGGAAGGA	+	6.22
ZNF263	MA0528.1	chr12:100569679-100569700	GGAGGAGAAAGGTGGGGGAGG	+	7.23
ZNF740	MA0753.2	chr12:100569846-100569859	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr12:100569847-100569860	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr12:100569848-100569861	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr12:100569849-100569862	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr12:100569850-100569863	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr12:100566835-100566848	GTGGGGGGGGAGA	-	6.24

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_02949

chr12:100563682-100644239

TACs

Enhancer Sequence

CAATATAAAT AACTCTTAAA TCATAAAAAC CAAGTCATTT TGAGAAAATA CAGTATGATC 60
TGTCCTGACT CCACCTACAC CTGCTTTTCC AGCTTTTCTA AACTGGAGGC GCCCTGCAAC 120
ATGAGTGTAC CCCACTCACT CCTCCCCGTC CCCTAGGGTC CTCCTTCACC ACCTGCTCAA 180
GTTGTCTTTT CCTTCTAGTC CCTTCCCAAC ATCCTTCAAG GCCCTCCTTC CAGTGGCCCT 240
CCTCTTTCCA GTGGCCCCTA TTTTGGCTAT GCCTTGCCAG TTTCTACCTC GGTGTCACAG 300
GCTCATCCTG CCTATGGAAT ACCTAATAAA AGTAGCTTAA GGAAGGAAAA GTTGATCTTT 360
GGCTCAGAGT TCAAGAGTCT GGTCCACCAT GGCAGGGAAA TCCCACTGGT AGAGAGAGCA 420
TCAGGCAGCT GAGAGAGACG GAGGCTCAGC TCGCTTTTTC CCCATTTAAA GTATTCTAGT 480
TTTATTACTA CCATGCATGT GTATGTATGC GTAGGCACAT ATGTAGCAGT CAGAGGACAA 540
CTCGGTACTA CTCTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGAGTGA AAGGGGTGGG 600
GGGGGAGAGA TCTCCATCTA CGATTTGCTT CTGCTATGCT GCATAAGGCT AGTGGGCCCC 660
AAGCTTCCGG ACCCTCCGCC CTCTCTGGCT TTTACACGTC TTCTGGGAGT GGTGCTCAGG 720
TTGCCTGGCT TGTGAAGCTT GGGCTCTTAC CTCCCCACCC CCAACTTTTT ATTCCGTCTG 780
AAACTTCCAG CCCGGAAATG GTGCTGCCCA CTTTTAGGGT GGGCATTCTC ACTTCAATTA 840
ACCTTAGGTT GGTCTCCTAG TTAACAATAT TAACCATCTT GGATGCCATT CTTCCTTACC 900
AAGGATTGCA TCAACTCTTA GACACCGGGC AGTGTTTCCA GAAACGACAG TGACCGCGAG 960
GTGGAAAATT GAAATGGGAA GAGAAACAGT GCAATCAAGC TGGCTTGGTC CTACCTCAGA 1020
CATCTGCGGC GCATGGCTAA CCTTCCTCTC AGACATATGC AATGGGAAAA AGCAGGGAAG 1080
TCTAGACGAC CTGGTTCCTG GGTGAAGTAG GAGGGACCTG GCACACAGTA GGTGCTCCGT 1140
CAGAGCTGGC CTGATGACTC CAGTGCCTAG TCACCCCAAA TACAGTACAG TTGAGGTTTA 1200
AAAGAGAAGA GGAAATCAAT TTGAAATTCT AACCATGCTA CAGGGGCTGC CTTCCAGAGT 1260
TCCTCTCAGA AGTCTACAGC ATTGGGTAGA AATAGATTTT TGTTTCACTC AACATCAAAG 1320
AGTTGTATTA GAGAAAGTCA GATGGTTTTC CTGCAACTTT GACTCCAGCA ACCCTGATGA 1380
CAGAGCCCAC CACATCTAAG AGCTGAGGGC AAGAGGGGCG GGGTCAGGAC GAGGGACTTC 1440
AAAGGGCTTT AGTAAGAGTA AAATTCCATC GGCATTAACA TGTGGTATGT GCGACTGTTC 1500
TTCCCTTTAA AGAGCTGGGT GCTGCGGCTG CTGAGTGGGG GGCTTTCGGT ACACAAGGCA 1560
ACGCCCCACC CCCAACAGGC CCAGGCACAC CTGCAGTGGG ATCCTGGGCG GGGCGGGGCG 1620
CAGCACAGAG GCCAAGCGGT CAAGGAGGAG ATGCCCCTTC TGTTGGTGAC ACCATTCCAG 1680
GGACTTCTGG CTAAGGGGAT GGACTGGCTC AGGGCTATTC CCTGGGAAGG AAAAGGAAGA 1740
TTGAGCGCAG GGAGGAGCCA GCTTTGTTCT CATCAAAGGG GGAAAGAACG GAGGGGGGAA 1800
AGCTAATGAG TTACTGCTGA GAGAGGAAGG CAGGATTAAG GGTCTGATGC AGAAAACACA 1860
ATGGACTGTT TGGCCAGCCT GGGTTGGAAG CTTTGCCCAT TAGGATGAGG GGCAGGGGCG 1920
AGGGGCAGGA GCTCCAGGCC TTACCTTTCA AGTGCCCATC AGCAGCACAG CAGGCCTCAG 1980
AGGGAAGCCT TCTAGCACCG GGCACTGGAT AGCCACGGAG CTGGGCCAAC CCAGGCCTGA 2040
GGCACCTAAC ACACAGAGAA GCTGGTATCG GAGTAGACAG CCTGGGGAAA AGAACATTCC 2100
CACGCAGAGG CAAGCAGGAC AAGCCTCCCG GGCTTCAGGA ATGGCAGTGT CCAAACAAGT 2160
CAGGCTTCCT TCTGTCCCTA AGGACACCAC AGCAGGGCTC GGCAGACAGA TGGGGAAAGG 2220
ACAGGAGGCA GAAACACCTT GCCCAAATGA CTCAGGTGCT TCAGGAGAGA GACACAGAAC 2280
TCAGCTCTTT GTTTCCCTCC AAATATTTGT GGACTTGGGG CTGAAAACAC TTTGAGCCAT 2340
TCTCATAGTG TGCTGGCCAC TGTAAGGTTA GCTGCCCACC ACTGAACATC TCCCAAAGAA 2400
ACCTCTATAC AAACCTTTGC TTAGAAGACC AAGAAGACAG ACAGAGCTTA CCATGGGCCC 2460
TGGTTTCCAT GGATTTTAAA TCCAACAGAC AGCACAGATT AGAAAGTATA AAGAGAGAGT 2520
TGGTGACACA AAACCAACCG ATATGTAGCG CAGGCAAAAC CAAGAGCATG AGATTGTCAA 2580
GGAGGAGAAA TCATATGTTG CTCCTCCGGG ACCAGGCACA AGAGTTTAGT GTCGAGCAGA 2640
GACCATGCTT CCTTCACGTA CCCTTCAGAA GTCCTCCCCT GAGGCAGGTG GTCTCAAGTC 2700
ACAACAAGAA TGAGTTCAGA GAGCTGAAGT AACTAGTCCA CATTCGCTTA CTGAGGGAGT 2760
GACCAAGCAA GAGTCATTTT CTGAGACTTG CTGAGACTGG CTCTGGACCA GGTGTGCATA 2820
CAGAAGCTGG GAGGGTGCCT GGTAGGCCGA GGACACCAGT CTGCGGCAGG GCTCCTGTGG 2880
ATCTTATGTC CTTCCATCAC CCGCTGACAA AGCAGCCAAG GGCGCCATGC TGACTGGATA 2940
TGGGCTAAAG GTGGAGCCCT GCTATGACTG TTGGCCTACA AAGGGGCGAC ACGGGGGTGT 3000
GGGCTGGGGA AGCCACTGCC AGCCTCTGCC AGCCTGACAT CTTTAGGTCA TTTTCATTTT 3060
TCTGCTCCCA TGTTCCTTCC CAACTGGCTT CTTCCTTCTT CCTCCCGAGG ATGCCCCAGC 3120
TGCTCGGTCC ATCTGTAGAG TGATTTAGGT CTCTCCATGG CAGAGTGGCA GTGCAGGTGG 3180
AGGGGAAGTT GGTTACGCGG ACCGGGGGTG GGACAGGCTT GCCGAGGCCA GGCCAGCAAG 3240
TTCTCCCTCT GTGTAAAGAG GGATTAAAAC CTCTATGTGC CTCAGTTTCT CCAAGGGTAT 3300
TAAAAAAAAA AAAAAAAAGA TGGCAGGTGA GGAATGGTTT TAGCTTAGGG GGAGGAGGAA 3360
GAAATACTGC TCTCCTTGTA GTTAAAAACA AATTTCTTCT GCTCAAAAGC CTCGCAAATG 3420
GGGAGGGAAG TGGGGCAAGG GAGGAGAAAG GTGGGGGAGG GGAAGGAAGA CAAAGCAGAA 3480
GGGGGGGAGA GATGTAGAAA GCTATAGCGG GGAGGAGCTG CCTCTGACCC TGTTTTCCTG 3540
TTCACCTTCA CTCCTCAGGA GCACCGCATG GGGAGGGGGC ATCGAAGTCC CTTAGAGGAA 3600
CAGGGCGGGG GGGGGGGGGG GGGTGTGAGC AGCTGGTGAA CAGACCTCCA CAAGAACTTT 3660
CCATGTCAGA GTAAACACAC AGAACAGGTC TCAACCTGGC CTACTGTGAT TAGCAACATG 3720
TTCTGGAAAA AGATAAGATT AGAAGACTGG TGTCTGGTGG CTTCTGGGCG TTTTCTCCAG 3780
ACAACAGGAC AATCACCACC AGTCATGGAG GGCTTTGGAA TTCCTGAAGA TTCGCAGGGT 3840
CTCAGTAATG AGTTGATGAA CGATACAAGC AGGACCTGGT GTCTGAAAAA AACCCAAAGG 3900
CTCTGGACAA AAACCACTTG ATCCTACGAG ACAAGGATAC CTGCCTGGCT CCTTCAAGAA 3960
GACTTCTATA 3970