EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-05261

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr12:88488850-88489370

Target genes

Number: 10
Name	Ensembl ID

2310044G17Rik	ENSMUSG00000034157
Ngb	ENSMUSG00000021032
Gstz1	ENSMUSG00000021033
Tmed8	ENSMUSG00000034111
Vipar	ENSMUSG00000021038
Ahsa1	ENSMUSG00000021037
Ism2	ENSMUSG00000050671
Sptlc2	ENSMUSG00000021036
1810035L17Rik	ENSMUSG00000021040
Snw1	ENSMUSG00000021039

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr12:88488856-88488867	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr12:88488857-88488867	GGGGCGGGGC	-	6.02
SP1	MA0079.4	chr12:88488855-88488870	GGGGGGCGGGGCTGA	-	6.01
SP2	MA0516.2	chr12:88488854-88488871	GGGGGGGCGGGGCTGAG	-	7.32
SP4	MA0685.1	chr12:88488853-88488870	GGGGGGGGCGGGGCTGA	-	6.05

Enhancer Sequence

GTGGGGGGGG GCGGGGCTGA GAGCTCGCTT CTTCGCGTGG CGCCACAACG ACTCCCGGCG 60
TGCACCTCGG CGCCCGCTCA CTCTACACCT GCGCGCTGGC CGCTGAACCT TATGGTGGTG 120
GTAGATTGGG CCGGGAAGGC TAAACTTGGA AGCTTTTGAG GGGCGTCCAA TCGCGCTTTT 180
CCCTGCTTCG GGTAGACAGA CCTCTTCTAG GGCTTTCAAA CATGGTTCCC TACTTTGCAG 240
TTTCGCGGCG CCCTTCGTAT GTCTCTCAGG GGACCTGGTG GTCCAGGCAT GCACCAAAGG 300
CAAGGGGGAA AGATGTGACT CTTTAACGAC GTTAATAATC ACTTGTAGTA TCTGCTCAGG 360
TTTCTAGTTT TGTCGGTTTG GCTCTAAGAA ACGATCTTGC TGTGCAGCCC AACCTGACTT 420
TGAACTTTGA CTCTCCCGCC CCCGCCTTCC AAGTGCTGGG ATTCCAGGCT GTGGCATATG 480
GAGCGTCCAG GGTTTAAGTC GAACTTCTTT AGTCCACCCT 520