EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
MM090-05246 
Organism
Mus musculus 
Tissue/cell
Limb_E11.5 
Coordinate
chr12:88146650-88150230 
Target genes
Number: 8             
NameEnsembl ID
TF binding sites/motifs
Number: 27             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr12:88148148-88148166CCTTCCAGCCTCCCTCCC-6.15
EsrrgMA0643.1chr12:88147725-88147735ATGACCTTGA-6.02
MAFKMA0496.2chr12:88148227-88148246AAATACTGACTCAACAAAT-6.14
Nr5a2MA0505.1chr12:88147724-88147739CATGACCTTGATCTT-6.07
RFX1MA0509.2chr12:88147458-88147474TGTTTCCATGGCAACC-6.99
RFX1MA0509.2chr12:88147458-88147474TGTTTCCATGGCAACC+7
RFX2MA0600.2chr12:88148484-88148500TGTTTCCATGGTGACA+6.01
RFX2MA0600.2chr12:88148519-88148535GGTTGCTATAGAAACT-6.06
RFX2MA0600.2chr12:88148519-88148535GGTTGCTATAGAAACT+6.14
RFX2MA0600.2chr12:88147458-88147474TGTTTCCATGGCAACC+7.31
RFX2MA0600.2chr12:88147458-88147474TGTTTCCATGGCAACC-7.42
RFX3MA0798.1chr12:88148484-88148500TGTTTCCATGGTGACA-6.15
RFX3MA0798.1chr12:88148484-88148500TGTTTCCATGGTGACA+6.1
RFX3MA0798.1chr12:88147458-88147474TGTTTCCATGGCAACC-7.59
RFX3MA0798.1chr12:88147458-88147474TGTTTCCATGGCAACC+7.5
RFX4MA0799.1chr12:88147458-88147474TGTTTCCATGGCAACC-6.78
RFX4MA0799.1chr12:88147458-88147474TGTTTCCATGGCAACC+7.28
RFX5MA0510.2chr12:88148519-88148535GGTTGCTATAGAAACT+6.16
RFX5MA0510.2chr12:88148519-88148535GGTTGCTATAGAAACT-6.18
RFX5MA0510.2chr12:88147458-88147474TGTTTCCATGGCAACC-7.26
RFX5MA0510.2chr12:88147458-88147474TGTTTCCATGGCAACC+7.31
RORAMA0071.1chr12:88147726-88147736TGACCTTGAT-6.02
RREB1MA0073.1chr12:88147375-88147395CCCCCAGCCACCCCCTCCAG+6.19
RREB1MA0073.1chr12:88147388-88147408CCTCCAGCCAACCCCCCCCC+6.1
ZNF263MA0528.1chr12:88148576-88148597ACCTCACCACCCCCCTCCTTC-6.37
ZNF263MA0528.1chr12:88148292-88148313CCCCCCTCCCCCTCCTCTCCT-6.59
ZNF740MA0753.2chr12:88147503-88147516GGGGGGGGGGCGG-6.64
Number of super-enhancer constituents: 10             
IDCoordinateTissue/cell
mSE_01277chr12:88127683-88178050Th_Cells
mSE_04026chr12:88144710-88150424Cortex
mSE_04392chr12:88146334-88150235E14.5_Brain
mSE_05545chr12:88146578-88147388E14.5_Limb
mSE_05545chr12:88147475-88149142E14.5_Limb
mSE_10068chr12:88144675-88147370Embryonic_stem_cells
mSE_10068chr12:88147488-88148528Embryonic_stem_cells
mSE_10068chr12:88149428-88151148Embryonic_stem_cells
mSE_10703chr12:88141088-88154624Olfactory_bulb
mSE_12065chr12:88147790-88149261Spleen
Enhancer Sequence
AAGTCACACA GCAAAGTGAA GAAACAAAAT TCTTAATGTC TCTGCTGTGG CTGGCTATGG 60
CAGTGACGGA GATTGTGGAA AATGAAGGGC AAGTCTTGGC ACCCAGTTCT AGCTGTTTCT 120
TTGGCTTGGG ACTCCATTTG GGGGATTATG AAGAAACCCT GGAGGAGAGG GTGAAGGATA 180
GGAGAGGCTA CAGGGACGGC CAGTGATTTC ACTCTGCCCT ATGGCATGAC CAAAACAGGC 240
CCTGAACCGG CTTGTAGAGG GTCACCCAGG AGCCTGGCGG TGGGAGGGAT GCTCTAATCA 300
AGGCTAGGCA AAACCTACCT TCTGCCTTAA GTCAGACCCA GTTCTCTGAT CTCCTGTGGA 360
TCTCAGTCCC TAGCCTGCCT CAGCTCCTGG CCAGTGGCCA GAATTTTTGC TGAGGTGATA 420
CAAAGAGGAG GAGAGAAGGT GGGCGCCACG ATCCCGTCTC TCCCTTCTCT AGAGCTCTGG 480
GTCCCTGGTG TGAAGTTCTC TCTGCACAAA TAATCCCAAG ATCCCCTCCC ACCCCACACA 540
CGTTCCAGTT CTTTGCTACC GGAGTTATGC AATAGAGATA ATTGTTCCTG TCTGGTTACC 600
ACCCGAGATT ACAAAGGGGT CGTGGCTGGG CCTCGGGAGG TGTTATCCTA AAGAACCCCG 660
AGGGCAAAGA GAGCCCAGAC AGCTCCTGTA GGGAAAAGGT GAGCTGAAGA ACAGGTGTGG 720
GTGCTCCCCC AGCCACCCCC TCCAGCCAAC CCCCCCCCCT GCAGCCATCT CAGATTACAC 780
TGAGCAATGC TTTCAAATGG AACTCCGCTG TTTCCATGGC AACCCAGCCA CGTGGTTGCA 840
CCTCAGAAGC TGGGGGGGGG GGGCGGGTAG AGGCAGTGAG GAGGTGAAGG GCAGCGACCG 900
GGAGCACAAC GCTCCTGCAA GATGAGGGCA GAGCGAAGCT ATCCATCGGT CCACTCCTGC 960
TGTCCCTCCT GCTCCTCACC CTTACCTCTG GGACTCCCGT GGAAGCCACA TAAAACCCCA 1020
GGTGCGGACA GAGAAGCTCT GGGACAAAGA GGCAGCCAGA ACTAGGCCCC CAAACATGAC 1080
CTTGATCTTC CATTATGTGG GCTATGGCTA TGGCCCTAGC AGATGCCCCA TTCCCCCACC 1140
CTAACCCCCG GTACCTTCAG CCTTTTCCAC AGAGGCTGGG GGCACCTGAG GCAACTTCCT 1200
GGTCCTTAAT CTTCATCTTT GGGATAAGCG TGTCTGCCAT GATGCTTGGG CAAATGTACA 1260
CAGGTAGGAT GACACACAGA GATGTCCAGA GTGACTTAAG GATGCTCAGC TCACCTGTCA 1320
GGTGGGGCCT TACCAGGGTA TACTAAGCCC TGTCACTCAG TAACTCTGGT CATGATGGGT 1380
CTTCCCTGAC ATGACCCTAA GCAGGAGACT CCCAATAGCC CTCCCCTCCT TCCAGGGATA 1440
CCAGTTTTCC TGCAGGCATT TCTTTATGCC TTAGGGCCCC AGTATGAGCC ACTGCCTCCC 1500
TTCCAGCCTC CCTCCCACAC CCAGCCTCCC CCATCCATCA ACAAGGGTGA GCTCAAAGCT 1560
CCCCCTACTC AGCTCTGAAA TACTGACTCA ACAAATCTCC CTCTACAGCA AATGTTCCTG 1620
CCCACACCTC CTCCTTAAGC AGCCCCCCTC CCCCTCCTCT CCTTTGTCAC CTCATGCCGC 1680
AGTGCCAGAA AGGCCCAGAG AGGGTGGCTT TCATTATTCT TTTTCTTTAT TTTTTATCAA 1740
AGGTTTGGGT TTCTGTTGTT GTTAGGATTT TTTTTTTTTT TCAAAAAAAA AAGTGTTTCC 1800
CTTGAGACAG TGCAGGCTCT GAGCAGGCTC CCCTTGTTTC CATGGTGACA GCAGCTGGCT 1860
CACATGTGTG GTTGCTATAG AAACTAGGAT GGTTCTCTCT TCTCACGTTC TCGTCCTTCC 1920
TCAACCACCT CACCACCCCC CTCCTTCTTC ACAGCACTTG GGGTGCAAAG AAAGACTCTG 1980
AGAAGCTCCA AGCACCTCAG AAGCCACCCA GGCCTTGCCT CCGGCTGCTT CTCTGTGCCC 2040
AGGGGTGGCT TCCTCAAAAG CTTTCTAGCC TCCTTAAAAG GAGGCAGGAG GACACAGACA 2100
ACCTGGAGTC TCCCAGACAA AAAGAGCTCA ATAAATATTC TTCTTGTGCT AGGCGTGTGG 2160
TCTAGTTCCG GGAAGAAGCC AGCCCAGGTG TGGGCCTTGG GACCTTGCCA GTGGTGTTGT 2220
CTGCTTCTTG CCAGCACAGG GGCATAGGCA AGAAAAGGCA TGGTTCTTTC TTGGGAGGAA 2280
ATGGGTGGCG GCAGAGCTGG AGAGAGGGTC GGGCACACCT CAGAGAGCAC TGGCAGCAAC 2340
TGTGTGGTAT GAATGATTGC AGTGCTTCCT TCCCTCTGTC AGCACAAGGG AAGAACTCTG 2400
CTTTCTGGAC ATCAGTGATG CCAGGGTCTG AGGAGAGCAA ACAGGGATGG AGGGGAAAGG 2460
GGCCAACCAT GAAACACTCC CAGTGAGACA GCATCTCGCT GGAATATCCT GCCAGGCTTG 2520
CAAATACATG CATAGATACA TAGATAAATA CATAGATAAG TACATAGACA GATAGACAGA 2580
CAGACAGATA GACAGGTACT CAGGTGATTT AGTTTAGTTA GGCATGCTTG CCTGTCAAGT 2640
ACCAAGCCCT AGGGCCATAC CTGTAATCTT AATAGGTTAC AGAGGTAGAC AGAAACTGGA 2700
GAATCTGAAA TTCAAGATAA TCCTCATGTG CTAAGCGAGC TTGAAGCCAG CCTGGGCTGT 2760
ATGAGACCCT GTCTCAAACA ATGACAAAAA GCTAAGACAT ACACTCATTC CACTGATCTC 2820
AGGAAAAGGG GAAAAAAAAG ATTCAGGTGT GGCCAGAGTC AAGCAAAACC CTCCATTTTC 2880
CTCAATAAAT GCTACAGCAG GCCGCAGAAC TATTTAATAT ACCTGCGCTG CCACACACTG 2940
AGGTCCAGAG AGAGAAAGTC AATACCCAGT GGTCACACAG CACGCAGAGA GACAGAGGAG 3000
CTAGGGCTCT TGAGTCTGAG CAGGAGAGAA ATGATTCCCT AGGTAAGGGT GAACCAAGAG 3060
TGAAAGATGC TGGTCTATGC CCTATATTAA GGTTGACAGC TGTGTGGGGG GCCCATAGCC 3120
CAAATGGGAG CCCCTCCTCT TAGGACCCCA GCCCCCTGAA GGTAAGTACT GGCACCTTCA 3180
TTCCCACTGT TCACCCTGTC TGTCCCTCAG GCCTCAGATG GGAATTCAAT TTATTAAGAG 3240
AAGACAGTCC CTGGGAGGTG TCTGGAAGCT GCCTTCAGAC AGACAGTGCC AGAGGGGAAC 3300
GTTCCAGCTC CTGTCCTGCC AGGCGGGGCA GGCAGAAGCT CTCCCAAGGT CAAAGAAGAC 3360
ATCATGTAGA TCCTTGTCCT CAGCCAAGGG CAAGCTTCTG GGTTCCCTCC CTCCACCTGC 3420
AGCCAGACAC AGGGGAAATG GATCAGAAAG AAGGCCCCAG TGACTGGGAG GAACCAGTCA 3480
CTACCCTAGA CTATTGAAGC CCCGGGGTCT TCCGTATATG CCTGGCCCCA TTGATGAACA 3540
GACAGGCAGT GGGAGAGGCA AGGGACAGCC CAGGCTCATT 3580