EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-05214

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr12:86486560-86487810

Target genes

Number: 17
Name	Ensembl ID

Npc2	ENSMUSG00000021242
Isca2	ENSMUSG00000021241
Gm17139	ENSMUSG00000092006
Fcf1	ENSMUSG00000021243
1110018G07Rik	ENSMUSG00000042350
Ylpm1	ENSMUSG00000021244
Gm19357	ENSMUSG00000093629
Prox2	ENSMUSG00000042320
Dlst	ENSMUSG00000004789
Rps6kl1	ENSMUSG00000019235
Pgf	ENSMUSG00000004791
Eif2b2	ENSMUSG00000004788
Mlh3	ENSMUSG00000021245
Acyp1	ENSMUSG00000008822
Fam164c	ENSMUSG00000045064
Nek9	ENSMUSG00000034290
Tmed10	ENSMUSG00000021248

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF740	MA0753.2	chr12:86487454-86487467	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr12:86487455-86487468	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr12:86487456-86487469	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr12:86487459-86487472	GGGGGGGGGGCGC	-	6.1

Enhancer Sequence

CAAACGTATT TAGCTCAGAG CGCGCCTCTC TTCAAATCTG GCATCTCACT CAGAGATATG 60
GTGTCAGTCA GTCTGTCTAT GAGAGCAGCT GTGCTTGGCC ACTGTGCAGT TCAGTGCGGG 120
GTGGGGGTGG GGGGACTGTA GCAGATGGGA AGCTGGCTGG ACCTTCCCTG AGCCTGGCGC 180
CTGTTCCAGG GACCCTGGAG AAGCAGCTGG AGTGAGGCCT AGCGATGGGA ACTCAGCCCT 240
CCCTGCTCCT GTCGCTTGCA CTCCGAGCCA TCAACCATGC ATCAAGTGTC TTAGCATGTG 300
CCAGGCCTTT CCCAAAAACT GTTTCATTTC CTTCTCAAAT CACCACTCTG GGGGGAGGAG 360
ACCAGTTCTC AGTGTCCACG GTTCACTGGC CAAACCCAGA GCATGCTTGC CCGCCTATAT 420
GGCTGAGAGG CATACACTGG TCCCTTTTTC TCCATGGGCT CCCAGACCCA TTAAAATGCC 480
CAGTGCTTCA AACTACACAC TCTCGGTTTC AACCCTAGAA AGTCTGTCTC CACAGGCTGG 540
GCATGGGGTC CCAATATCTA CGACCGGATG GCTCTTAGAA CTGACTAGGG AGCCCTGGGC 600
TAGAGGCAGA GGGCAATCTA ATAAAGGCTC AACTCTTATA TGACCTCTTT GTGCCTCAGA 660
TTTCTCCACT TTAAGAGGGG TTGGGATGCT GTCTTCTATC TTCTTGTCTA CTCTGGATCA 720
AGGGAAAGGG AAAAGGTGCA CGATGGCAGG ACTACCAGAG GAGAAAGGGC GGAGCTGCCC 780
AGGCCCTGGA CGATCCACGC CATCTCAAAG AAATGCATAT GTCCACGGGT CAGGCTGGAG 840
AGAAGGACCT TTCAGTACAG GAAGTGCTCA GCTGTGTGTG TCGGGAGGGA GACTGGGGGG 900
GGGGGGGGGC GCTGCAGCTC TGGCGGGCAG ATTGAGTGGA AGGAGGAGGG TTGTGGGAAA 960
TGGGCAGAGC AGCAAGTGCT GGACGGTTCC CTGGGCTTAG CTCCTCCCAC AGGCTCTGGG 1020
AGCTTTCTGT CTGAGAGGGC CGGGCCGCTG TCTGCTTCTT CTCATTCTCC TATTCCTCTG 1080
TAGAACCTGA CAGGTGTATT TTGGGAGAGA AGAGGAACCA CTGGACCGGG CTGCTCTCTC 1140
TTCCGATGCA GGCAGCACTA TAGACGCCTT CCATTCTATC CTACCTCCCC ATCCTCCGCC 1200
ACCCCTAACT GTACATGTCT GCTTCCCTCC CCGCACCCCA GAGCTTGCTC 1250