EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-04408

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:117276910-117277680

Target genes

Number: 16
Name	Ensembl ID

1110005A03Rik	ENSMUSG00000090266
Jmjd6	ENSMUSG00000056962
Mfsd11	ENSMUSG00000020818
Srsf2	ENSMUSG00000034120
2810008D09Rik	ENSMUSG00000086859
SCARNA16	ENSMUSG00000088529
Sec14l1	ENSMUSG00000020823
7SK	ENSMUSG00000089343
Gm11745	ENSMUSG00000084052
Sept9	ENSMUSG00000059248
Gm16045	ENSMUSG00000086050
Gm8624	ENSMUSG00000083705
Gm11734	ENSMUSG00000085419
2900041M22Rik	ENSMUSG00000054418
Tnrc6c	ENSMUSG00000025571
Birc5	ENSMUSG00000017716

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LMX1B	MA0703.2	chr11:117276930-117276941	TTAATTAAATC	-	6.02
SP3	MA0746.2	chr11:117277431-117277444	CGCCACGCCCATC	+	6.23

Enhancer Sequence

AAGCTTTCCA TTTACAGTAT TTAATTAAAT CTTTAAATAA ACGGCGCGGG CTCAGGACCA 60
GATGGTTCTG CATTTTCATT GTGGAGCGGA GCCTCGAAGT CATCGAGGGA AGTATATTGG 120
AGGCGCAGCG TAGATAAGCA GGATATATGG AGCAATAAAA TCTAATCTGG TTTCCAGTGG 180
GGAGATTTGG TGTATGTACA CAACCCAGGC TCAAATTGTA AGTTAATTAC ATTAACCCCG 240
GTGTACTCGG AGATCTGAGC AGCCCGAGAT GAAATTAGTC TTTTTCCTAT CCTAAGATTC 300
TTTTCAACTT CACTATATTA ATTTCTAGCC AAATACTTAC TCATAAGGAA AATTGAAGTT 360
AATGTAACCA AAGATAAAGG AACGCAGCCT TAATATTCTG AAGGGATTAC GAAGACCCGA 420
GGAAACGAGC TGTGCAAATG TCACTGGCTT GGGGTGGATT TATGCAGTGG GGTACGGGGA 480
GCGATAAAGA TGCCAAAGAG ACCTTGCTCT GCCCATGGCT CCGCCACGCC CATCTCCCCG 540
CCCACCTCCA TGCCACACCC ACCGCCCTGC CCAGCTAGGG TTCTTAAAGG GCCTAAATGA 600
AGAAAATGCT GTCTTTGGGA CCACACAGTC TCCCCAGTTC CATGGGGGCT TTTGGGGAGC 660
GACCCAGATT CCGGAAGAAG TCATAGCTTT GTCTCTGACG TAAGACAGGC AACCAGCCAG 720
ATGTCTAAGA TTCACTGATT CTTAAGACCC CACCCCCCAA ACCGTGAATT 770