EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-04405

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:117231500-117232730

Target genes

Number: 17
Name	Ensembl ID

1110005A03Rik	ENSMUSG00000090266
Mfsd11	ENSMUSG00000020818
Srsf2	ENSMUSG00000034120
2810008D09Rik	ENSMUSG00000086859
SCARNA16	ENSMUSG00000088529
Gm11730	ENSMUSG00000087057
Sec14l1	ENSMUSG00000020823
7SK	ENSMUSG00000089343
Gm11745	ENSMUSG00000084052
Sept9	ENSMUSG00000059248
Gm16045	ENSMUSG00000086050
Gm8624	ENSMUSG00000083705
Gm11734	ENSMUSG00000085419
2900041M22Rik	ENSMUSG00000054418
Tnrc6c	ENSMUSG00000025571
Tk1	ENSMUSG00000025574
Birc5	ENSMUSG00000017716

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr11:117231517-117231528	ATGACCTTGAA	-	6.62
Esrrg	MA0643.1	chr11:117231517-117231527	ATGACCTTGA	-	6.02
NR2C2	MA0504.1	chr11:117232200-117232215	TGACCTCTGACCCTT	-	7.85
Nr2f6	MA0677.1	chr11:117232200-117232214	TGACCTCTGACCCT	-	6.93
RARA(var.2)	MA0730.1	chr11:117231507-117231524	TGACCTTAAGATGACCT	-	8.42
RXRB	MA0855.1	chr11:117232200-117232214	TGACCTCTGACCCT	-	6.87
RXRG	MA0856.1	chr11:117232200-117232214	TGACCTCTGACCCT	-	6.68
Rarb(var.2)	MA0858.1	chr11:117231507-117231524	TGACCTTAAGATGACCT	-	8.57
Rxra	MA0512.2	chr11:117232200-117232214	TGACCTCTGACCCT	-	6.73

Enhancer Sequence

GCCTGAATGA CCTTAAGATG ACCTTGAAAA TCCCCCCCCC CCCTCCCCAA GTCCACTGGC 60
TGCAAGGGAC TGCTGATCTT GTGAGTTCAA GATACATCAA AATCCCAGCC AGCCAGCATC 120
CACCTGGGCT GGCAGGCTCC ACAGCTCCCC TGGAGACTCC ATAGGATTCA CTACCAGAAA 180
CCTGGCCCTG ATCTCTGTGT CTTGGCCTCC ATTGTAATAG GGGCCTCCGT TGACTCCCTG 240
CCCAGATTCC TCCAGAATGT TCTGGCTTTT GTCAGTTCAA GGCTGGCCCT GGCAGCCGTG 300
GAAGCAGGGA GTGTGTGTCT AATAAAGTCA GCGCTCTGTA ATTTAGCAAT TACTGAAACC 360
CACACTTGTA ATTTAGGGGG TTTCTTGTAA TTCTTTGTAG TCTTTATCTC TCTTTGAACA 420
AATGTGCAGC TTAATAGCTT CCTCCATCCT GTTCCAAGGG TTGGTATTTG CCACCCCTCC 480
CCCACTCAGC TCCAGTTCAT GAAAGTGTCT AGATTGTGTG GAAGCCACTT TCCAGAATCC 540
AAAAGGTTAA TTTAAAGGCC AGCCTTCCCC CCAACCCCAG TGCTGGCTCC TGACAGTCAA 600
GCAGTATCTC CAGGGCCCCG AGTTTGGCAC TCCAGCTGTT GGTTGGGTAG ATGGCGTGAT 660
CCACCTTCGG CAGGGTCTGT GGTTGGGCCA TTCCCATTGC TGACCTCTGA CCCTTTGCTC 720
AAGCAGTTAC TAAATACTTT GGTTTTGAGA CTCCGTTGGG AATCAGAGCC ATCAAGGACG 780
GGCTGGACCT CTCTCTCCAG AGGCCTTCAG TCTAGTGAGA AAAGGATGGC TGGCTGTCTA 840
GGACGTCACA GGTCCCAACC GAGCTGGCAC CCGGGACCAT GGCAGCCAAG GGAACCACCC 900
TGTCAGAATG AGCTGTAAGA GGAGGGAATG GGAGTCTGGT GCGGAGGAGG AAGAGGGACA 960
AAGCCTGAGG AGGAGCCCTA CAGAGGGCAC CCAGTTTTTA GAAACTGTAT TTGAAACAGC 1020
TTTGGGTCGA GGATGTGGCT CAGTTGGTAG AGTCCGTGCC TGAGAGTCTT GACTTGGTTC 1080
CCAGTGTTCC GTGAGTGTGA CAACACATGC CTGCAGCCCC AGCACATGCC TGCAGCCCCG 1140
GCACATGCCT GCAGCCCCGG CACATGCCTG TAGCCCCAGC ACATGCCTGC AGCCCCAGCA 1200
CATGCCTGTA GCCCCAGCAC ATGCAAGTTG 1230