EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-04352

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:115872630-115873820

Target genes

Number: 28
Name	Ensembl ID

Sumo2	ENSMUSG00000020738
Nup85	ENSMUSG00000020739
Mrps7	ENSMUSG00000046756
Gga3	ENSMUSG00000020740
Slc25a19	ENSMUSG00000020744
Grb2	ENSMUSG00000059923
Tsen54	ENSMUSG00000020781
Llgl2	ENSMUSG00000020782
2210020M01Rik	ENSMUSG00000048442
Sap30bp	ENSMUSG00000020755
Recql5	ENSMUSG00000020752
Itgb4	ENSMUSG00000020758
H3f3b	ENSMUSG00000016559
Unk	ENSMUSG00000020770
Unc13d	ENSMUSG00000057948
Wbp2	ENSMUSG00000034341
Trim47	ENSMUSG00000020773
Trim65	ENSMUSG00000054517
Mrpl38	ENSMUSG00000020775
SCARNA4	ENSMUSG00000088290
Fbf1	ENSMUSG00000020776
2310004N24Rik	ENSMUSG00000020778
Cdk3	ENSMUSG00000092300
Evpl	ENSMUSG00000034282
Srp68	ENSMUSG00000020780
Exoc7	ENSMUSG00000020792
Foxj1	ENSMUSG00000034227
Fam100b	ENSMUSG00000050628

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr11:115872984-115872994	GGGGCGGGGC	-	6.02
ZNF740	MA0753.2	chr11:115873272-115873285	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:115873273-115873286	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:115873274-115873287	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:115873275-115873288	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:115873276-115873289	GGGGGGGGGGGGG	-	6.03

Enhancer Sequence

TTTGTTTTTA AAGTTTTTGA AAACAGGGTC TCACTGTGCA ATCCTGTCTG GAACTTTCTA 60
TGTAGATCAG GCTATCCTCT AACTAAGAGG CCCACCTGCC TCTACTTCAG AATGCTGGGA 120
TTAATAAAAG TATATGTGGG TGGAATATCC CATTGCAAAT AGAAAACTCA TGTCACTTGA 180
AGTTCTAGAA CAGCCCCAGG GTGACTGAAG CAACCAGGAT CCAAACCCCA AGGTTCTGTC 240
GTCTGGGACA CACAGGGCCG TGAAGGGAAT AGGCTTAGCT TGAAGGAGAT GGGAGAAAGC 300
GCTTCAATTA AGCGTTAGCC TTGGGGGCTC AGAGCACAGC CTTGTGGGTC TTCAGGGGCG 360
GGGCCAGTGG TGATAGGAAT GTGAACCTGG ACTCTGCCCT AGCTAGCGTC CAACTGTGGG 420
CCAAAGGGGA CAGATAGTGA TCTTATGCAA AAACAGGCCC AGAGGGGCTC CAGACTTCCT 480
CCCACCTGGA CCCAGCTCTG CACGCGGTAA TCCCTTGTTC AGGAACTACT TATGCGCTGA 540
GAGACCCAGG CTGAGAGTCC AAGAACCGAA TGTGTAACTT TGAGGGAGTC ATTAGTGCTC 600
TGTGGATCTA CTGTTTTCTC TGTAAATTCA AGGGGATGGG CCGGGGGGGG GGGGGGGGGA 660
AGCTACATTT ACACAGGTCT ACCTTTGCAT AGGTCTAGGT CGGTGCTGTG GGCCCAATCA 720
AAGTCAGAGG GCTAAATAAC CTCCTTTTTT TTCTTTTTCC TTGTTTTAAG AATCTTACAG 780
CCCAAGCTGT CCTGGAACTC ACTTTGTAGT TCAGGCTGAT CTTGAACTCG TGGCAATTCT 840
CATGCCTGAG CTTCCCCAGT ACTGGACTAT TAGGAATGCG CCACCATGCC TAATACTCTC 900
TTATATTGCT TCCTTGGTCC TCACATTTTT AAGAGGTTCA TACTTCCAAG TTGTGGGCGA 960
TGCCCCCAGA AGGCGGGCTC GAGAAGACAA ACCGCACAGC CCCCCTCCCC CCAGCTCTGG 1020
CTTCCTGTCT TCGCACGTGG ACAACTGCAC GTCCCGGGGT CTCTCACGTC TGCTAGACCG 1080
CTTCACTCCG CCTTCCACCC GGAGGGTACC CGCCCTCCCG TGCCCCCTAT GCCAGCCCTT 1140
CCCTACCGCA GGCCGGGCCA GCACACACAA GGAAGGGTCC CCAATGCGGC 1190