EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-04351

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:115691500-115696110

Target genes

Number: 30
Name	Ensembl ID

Ict1	ENSMUSG00000018858
Atp5h	ENSMUSG00000034566
Nt5c	ENSMUSG00000020736
Hn1	ENSMUSG00000020737
Sumo2	ENSMUSG00000020738
Nup85	ENSMUSG00000020739
Mrps7	ENSMUSG00000046756
Gga3	ENSMUSG00000020740
Mif4gd	ENSMUSG00000020743
Slc25a19	ENSMUSG00000020744
Grb2	ENSMUSG00000059923
2310067B10Rik	ENSMUSG00000020747
Caskin2	ENSMUSG00000034471
Tsen54	ENSMUSG00000020781
Llgl2	ENSMUSG00000020782
2210020M01Rik	ENSMUSG00000048442
1110017F19Rik	ENSMUSG00000075420
Sap30bp	ENSMUSG00000020755
Recql5	ENSMUSG00000020752
Galk1	ENSMUSG00000020766
H3f3b	ENSMUSG00000016559
Unk	ENSMUSG00000020770
Wbp2	ENSMUSG00000034341
Trim65	ENSMUSG00000054517
Mrpl38	ENSMUSG00000020775
Fbf1	ENSMUSG00000020776
2310004N24Rik	ENSMUSG00000020778
Srp68	ENSMUSG00000020780
Exoc7	ENSMUSG00000020792
Fam100b	ENSMUSG00000050628

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr11:115694396-115694410	GTTCCCCAGGGACT	+	6.17
ESR2	MA0258.2	chr11:115693229-115693244	AGGTCACTGAGCCCT	+	6.06
IRF1	MA0050.2	chr11:115694798-115694819	GTTTGCTTTCTCTTTCCGTCT	+	6.93
IRF2	MA0051.1	chr11:115694797-115694815	TGTTTGCTTTCTCTTTCC	-	6.67
MEOX1	MA0661.1	chr11:115695588-115695598	GCTAATTAAC	+	6.02
Nr2f6(var.2)	MA0728.1	chr11:115694003-115694018	TGACCTAGTGACCTC	-	6.86
RREB1	MA0073.1	chr11:115692752-115692772	CCCCACCCCCACCCCACCCC	+	6.27
RREB1	MA0073.1	chr11:115694265-115694285	CCCCACCCCACCCATCCCCA	+	6.58
RREB1	MA0073.1	chr11:115692758-115692778	CCCCACCCCACCCCCAGCGC	+	7.08
TFAP2A(var.2)	MA0810.1	chr11:115693113-115693125	TGCCTTGGGGCA	-	6.62
TFAP2B	MA0811.1	chr11:115693113-115693125	TGCCTTGGGGCA	-	6.74
TFAP2C	MA0524.2	chr11:115693113-115693125	TGCCTTGGGGCA	-	6.62

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_05227	chr11:115692020-115695559	E14.5_Heart
mSE_08119	chr11:115689951-115701913	Kidney
mSE_10264	chr11:115690231-115695565	Embryonic_stem_cells
mSE_11766	chr11:115690835-115695254	Placenta

Enhancer Sequence

CCTCCCCTGT CCATCACACT TGGGGGCCCT GTCTCTTCCC CTTTGGTCCT ATGTACCGTG 60
CAGATAAACC AGACGCCGAT GCCATAACCT TTCCGAGGTG ATTTCCAGTG TATTCTACCT 120
GGCTTCCAAA CCCTGTACAC TGCTTTCTCA CTAAATAGAC TTCTGTTCAC AGCCAGCTTT 180
CTGTTGCAGG TCTGAGCCCC TTCACGGGGT GGGGGTGGGG GGGTCCTTGT CACTGGTCAT 240
TTAAGGCTGC TTCTTATTCT CCTGATAGCT AAGGCTAGAG AAGGAAGTGT TGGCCCACCC 300
GTGTGGTTCT AAGGAACTTT CATTTTATAC ATCTTTAGGT GTATGTGCAT GTTCATGCCT 360
GTGAGTGGGT ACACATGTGT GTGCACGTGT TTGTGGTAGG GCGGACAGGT CTCCTTCAGG 420
TGTCATTCCT CAGGTACTGG CCACCTTGGG TTTTCTGAGA CAGGATCTCT CACTGACCTG 480
GAACTCACCT TGCACAGTGA GCCACAGGGG TCCGCCTCCC GGAACTCGCT GTGAGTAGTG 540
AGCCACAGGG GTCCTCCTCT CTCAGCCTCT GCCCGGAGGT TACAGGCACA CACCCCCACC 600
CCAGCTCTTT GACCTGGGCT TTGAAGGTCA AGCTCGGGTC CTCATGCTTT TGCAAGATAA 660
CTTTTCTGGC TGAGCCAACC CCTAGCCTAA AATGTGATCA CTTTACGACC AGGACGGGCT 720
CAAGGGATGA GGAAGGCTTT TTTGAGTCCT GTCGCTAGAG GGTCAGAAAG ATTCTTCAGA 780
CAGCAGTGGC AGCCAGAGGA GCCAGGAAAG GGCCAAACGA GAGGAGGGGC TGTGTGTGGT 840
GAGACCCGAC GGAGCGGCCT TCCCTGCGGC CCTGCCTCTG GCCGGCTGGC TTTTTCATCT 900
TTCCGGTGTG TGTCTGTGCT GCGAGGTGCT ATGCGAGTCA CTCCATGATC TCAGCCTGGA 960
CTTGCCCCAG TGCTCCTGGA ATGTGCTCCT TATCCTGGCC CACGGCACCA TGCTCTTCCA 1020
CCCGCCTGAC CCTTAGCCCT GCCCTAAACC TTATGTGGCC GGTAATACCT GTCACCGAGG 1080
TCCTGAGTAG GGGATACGAG GAGAAAGTAG CAGGGAGGGG ACAGTTGTAG ACTGGGGCGA 1140
GGGAGCATTT GAGCGGTGGG GTTATGTGGC GGTATCCTAG GCAAAGTGTC CCGGGTAGAG 1200
TGCTGTGAAC ACATAGGGCC AAGAGGCTGA CCAGTAACTC TCAGCGAGGC TTCCCCACCC 1260
CCACCCCACC CCCAGCGCCC TTGACCTCAG CATCTTGTAT ACTTTCTCCT TCCCCACTCT 1320
ACTCTCCCTC CTGCCAGAGG GCATCTCTCA TGGCCTGTCT GCCTCAGGAG TCGGCACACT 1380
GGGGGGCTGT AGGTTTGCCC CCTTAGTCTT TTAACCTCCC CATTTCCCAG GCATAGGCTA 1440
GGCAGGATCA TCCCCTATCA GACTTCACAG CCCTAGCCTG ACTTCCAGGC TCCTCTGAGA 1500
GCTTGCTTAT CTGGGGTAGA AGGCCTGGGG TGGGGGAGGG GGCTTTCTGA ACTGAGCCAG 1560
GCCCGCACCT GTCCTCCTCC TCCTCTAAGA AGGGGTGGGG TATTTTCATG CCTTGCCTTG 1620
GGGCAGTTAC ACTGGCCCCA AGCCTGTTCT ACCTCCACCT TGGTCCCAGC TCCTAGGTCG 1680
CTCTTCTGTC TCCCTGGCCA ATGGGGTCCC CAGCAGTAGG TCCCCCACAA GGTCACTGAG 1740
CCCTGCAGGT TAGTTCTTAA GAACACTCTG AAAGCAGTGA CCAGGCACCT GGTCCCAAAC 1800
TGCTTGGTTA GCTTTGAGCT CCATGGCCTG TGGGAGTATG TGCGCGTGGC CCTACCTTTT 1860
GACTGCAGCC ATATAATTAG CTCTCCTGTA ATAGCCATTC CTCATGGACG CCTTTATAAG 1920
CCCCTCAATT CTGGAGTTAG TCATACATGG GGGTCAGCTC TGAGTTCTGC CGCTTCCTAT 1980
GCAGTGGTGA CCGTGGGTAA GTTGCTTAGT CTGTGGCCTG GTTTCCTCTG TCAGGTAGGT 2040
GTGTTCTGCC TGGCCTCTCA GGTGGCCTCC GCCTGAGCTG ATGTGTAGTG TTTACCCTGA 2100
GCACACAAAC AACAGAGGTG GTCAGAACCT GGTCCCCACA TTTTCCTGAG GTTCTCTGGA 2160
GGACGATTCA CCCTCAGTGA TTTGATGTTT CTACAGTGAG CCTAGACAAC TTGAACCAAA 2220
ACATTTAAAA CGTATCAACA GGTACATTCA GGGGGTCTGG AACAGTGCTG GTCACAGCAA 2280
GTGCTCCGAC GGCCACTTGG GTAGGTAGCC TGCACCGAGT GTTCTGCCCT CCTGACCAAG 2340
TGGGGCATGT CCCCTCTTTC CTGCCACTCA CCACTTTGCC GTGTCACTTT GAGCTCCTGT 2400
GGGGTCCTTA GTACAGATGG TCCTGGTCCC TTCTTGTCCC TTCCCTAGAG TCCGCTGGTC 2460
TCTTTCCTTT CCCAGGGAGT CATTCCCAGC TTCCTGTGCC TTCTGACCTA GTGACCTCGG 2520
CTGGGGAGGG GAGCGCCTGC ACCCCAGGAG CCGTAGCTGC TGATTTACGA GCTTGCACCA 2580
CCCTCCCCCA CGGCTGGAAT GTTCAGCTAG CCAGCTCAGC TGTCTTCAGA GGCAGAGATG 2640
GCCGAAGTCT GGGGCCTGTT TTCACTCCAG TCCCAGGAGC CCCCAGTACT TGATGCCCCA 2700
TGCTTGTTCT CTGGCTTGTT ATGGGACCTC AGGTGGGTAC CCAGACTTTC CCACCAATCC 2760
CCACGCCCCA CCCCACCCAT CCCCACGAGT GGGAGGCTCT GCAGTGGTCT TGCTTCCCTA 2820
AAAATGTGAA ATCCCTAGTC TCTCTCCCCT CCCCCACTGC AAATCATGAC CTTTTGATTG 2880
TCCCCAAAGG GTGACAGTTC CCCAGGGACT GGTCCCTGGT GTTTGGTTTG GAAGTGGCTT 2940
GTCCTGCTGA TCTTTGCATT TGCAGGGGAT GTGGCTCTAT CCGCAGCCAG CAACTGGGGA 3000
GCCCCAGTCT TAAATCCAGA GTCTTTTCAT AAGCAAAGTC TTGGCCCTTT AATTGATTGA 3060
TTACAGAGCT GAGGATGAAG GGCCTTGTAC ACTGCCACCA AGTGCTCTGC CTCTGAACTG 3120
TACCCACCCC TGCCCCCAAC CTTCAGGCTA TCTTTCCAGC CTCGGTTTAG ATAAGAAGCA 3180
CCCCCCCTTC CCCAGTGGAG GCTGGGTGTC CCGTCCCTGC TCCAGCTTAA GTACTTAGCA 3240
CACTTTGTCG GCCTGTCTAC CTGACCCTAC ATGCAGCGTT CAGCGAGCTG GCGGCTATGT 3300
TTGCTTTCTC TTTCCGTCTA GAGTGGAATG AAGGAAGCCA TTTCTGTAAT GGCCTGAGTG 3360
AGCCCCTGTG TTCCTAGGAA CATGCCCAGT GCCAAAGATG GTCAGCAGGA GACTGCTACT 3420
GGGCGCTGAA AGTCAAACCA CCCACTCACA GCCCCTCCCC CAAGGAGAGT ACAGAAATAG 3480
TTTCCCCCCT TGGGCTGGGA ATGCTTTCTA TGGTCGATGA GTGGCTTGGG GGTCTTGAGC 3540
TGTTTTCTTT ATTCGGTACA GATAGAATGT CTTCTCTTGA TTTGGGCTCC GCTGTGGCCC 3600
TTAAGAAAGG CCTCCTTAGG GAGTGGCAGG AAATAGGGTC TCACTTTGTA CCCTTCATGG 3660
CTTTAAACCC TTGATGCTCT GTTTCCCCAG TGACCTAGGT TACACGTGTG CCACCATGCA 3720
CATCTGAAAA GGAACATTTC TAGATGCCCA GTCAGAGCTC AGGGAGCTAG CTGGGAATTA 3780
GCAGCAAGGC AGATCTAGGA TTAACCTAGA GAGCCCACAG CCTCATAGGA CCAGACCTGG 3840
TCCCCAGCAC CACGGGGCTT GGCTATGTGA GTCTTTGATG GGCTCCTTGC CCATCTTACC 3900
CCGACCTGGG TATTCCTGCT AAAACTGCCC CAGGTCCTTC CCCTGCATGT CCAGTTGAGG 3960
CACCGATCAA GAAATTCCAC AGGACAGCCC CGCTTCTGCC AACCCACTGC ACGGAGGGAG 4020
GCTGTGAAGT TTCTCTTTCT GGATTTTTAT GTTTTTTTTT TTCTTTCAGA AAACAGGTTA 4080
ACAATTAAGC TAATTAACCA CAGGGCCTGC TGGCTCTCTT TGTTCCTATA AAGCTGGGGT 4140
AAATGGCTTC CTCCCCCAGT TTCTCCTGTT CCCATTATGG TAACTGGTGG CATTAGAGCA 4200
TCAACCACGG GGAGAGACAG GCCCAGACCT CCAGGAACCA AGGCCTCACT GTCTCCCTGT 4260
CCTGGGCCCT TGCAGTGGAA GGAGCTCAGG AAAGTGAGGG TGAAGCTGGG CTTAAGAAGA 4320
GAGGCTGGTG GGGAGGTTCC CGGCCTGGCA GGGGAGGTTC TGGGCCTGGG CCTCAGCAGC 4380
TGGGGCCTGG GTGATCCTGG GTCTTAGGAG GGCCTGGGCC TGGGTGATAC TGGCTCTGGG 4440
AAGCTGTGAA CCTGGGTGAC CCTGGGCTTG GACAGCTGTA GGCCTGGGTG ATCCTGGGCC 4500
TTGGACACCT GTGTCCAGGA TGATTCTGGC CCCAGGAAGC TGTGGGTCTG GGTGAGGCTG 4560
GGCCTGGACA ACTGTGGGCA TGGGCTCAAG GGCACTTTTG GTTTCTGCAG 4610