EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-04164

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:106132460-106133800

Target genes

Number: 17
Name	Ensembl ID

Dcaf7	ENSMUSG00000049354
Gm11646	ENSMUSG00000085033
Taco1	ENSMUSG00000001983
5330430P22Rik	ENSMUSG00000085255
Map3k3	ENSMUSG00000020700
Gm11672	ENSMUSG00000085229
Gm10840	ENSMUSG00000075480
Limd2	ENSMUSG00000040699
Strada	ENSMUSG00000069631
Ccdc47	ENSMUSG00000078622
Ddx42	ENSMUSG00000020705
Ftsj3	ENSMUSG00000020706
Psmc5	ENSMUSG00000020708
Smarcd2	ENSMUSG00000078619
Tcam1	ENSMUSG00000020712
Cd79b	ENSMUSG00000040592
Ddx5	ENSMUSG00000020719

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr11:106133267-106133285	CCTGGCTTCCTTCCTCCT	-	6.03
IRF1	MA0050.2	chr11:106133354-106133375	AAAAAAAAAAAGAAAGAAAGA	-	6.25

Enhancer Sequence

GGAATATGCA TACATCATGA AGATCTATTT CTGAGACTTC TACCTAGAGA CACCAGCAGG 60
GGACAGAGCA AGCTACAGTG CACACCTCTC ACCTCTCTGG CACATAGGTT GAGAGACATA 120
TGGCCTTGTC AGGAACCTGA GGGATAAGGA AAGAGAGGTT GGGCGTGATA GTGTGTGACT 180
GTAATGCCAG ACACTTGAGA GAAAAGAGTT CAAGGTGGGC TTTGGCTACA CAGCCAGCCT 240
GGACTATATG AGACCCTGTA TCAAAAAGCA AGTAACAAAA GTGACAAGGA TGTGGGAGAA 300
GGATGGGCAC AATCCCCAGG AAAGGAGGTG CAGCTCCCTG ATACAGCAAT CGTCTGCCAC 360
GTGCAAAGCC CTGCCTGGAT TCCATGCTCA GCACCAAAAT GCAAAAGCAA AACAAAATTC 420
CCAAACATTC TGGAGCCACT TGAACCAGAG CTCTGGGGAA TGAGGAGCGC CACATGCAGA 480
ATCAGGCTGA GTTCCCAATG CACTGACCAC GGGTCCTGTC TCTGCTTGTC AATGGCCTTT 540
GATGCTGCAA CCTGAGACAG CTCTCTGCCA AGACAGAAGG GTCAGGGCAG TACCCTGTGC 600
AGCCCAAGAC CAGCAGGACT CCACAAAGCC TCCCTGCTCC TCCAAACTTT ACTGGACACT 660
GGCATCAAGA AGGAAAGCCC CGTACAGAGG ATATCTTGAA TGGTCTGTTA ATGGGATCGG 720
GCCTTCTTCA GACCTGGACA CAGCTATTTC TAATCTATCC TGGAGTTATC TGGGCCCAAT 780
CTCTTTAGTC TCCCATTTCG TAGGAAGCCT GGCTTCCTTC CTCCTCAACT TGAGCAGCTG 840
GGAGCCATCT CAGACATACT AACGCTCTGC CAGTTCCCAA CTAGGAAGAA AAAAAAAAAA 900
AAAAAGAAAG AAAGAAAGCC AAGGCAGAGA TGCAGTGGGA CCGAGGCCAA AGAAAGAGTA 960
ACCCTGTTTT CTCACTAACG ACCCTCTTCC AAATTTTCCT CACCACATCC CGGGTCACTC 1020
CCTCACCTCC ACTCCGGGAC CTGTCTTACA CTTTCAACCT GATTGCCCAC AATTCTCTAG 1080
ATCTCACGAA GCCTCCATCT CTAAGTTACT CGGAGCCAAG AAGCCCCGGG ACTCCTCTAA 1140
CTGCTCAAGC CCTCCACCGC AGAGGGCTTT CACCCTTTCC CCAACACTGC CTCCAACCCC 1200
GAGCCACTAA CCAAGGGACT CTGGCCTGCC CGCCACCAGC CCTCGACAGT TCCTCCTGCA 1260
GTGTCCCCTG GGCCGCCTGT CCTCACCTGA GGCCCCAGGG AGACCGACAC AGCGCCCTCG 1320
CGGCGCCGCT CGCCTGCCCT 1340