EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-04107

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:103001820-103004680

Target genes

Number: 15
Name	Ensembl ID

Gpatch8	ENSMUSG00000034621
Fzd2	ENSMUSG00000050288
Ccdc43	ENSMUSG00000020925
Gjc1	ENSMUSG00000034520
Eftud2	ENSMUSG00000020929
2410004I01Rik	ENSMUSG00000085338
Nmt1	ENSMUSG00000020936
Dcakd	ENSMUSG00000020935
Plcd3	ENSMUSG00000020937
Acbd4	ENSMUSG00000056938
Hexim1	ENSMUSG00000048878
Hexim2	ENSMUSG00000043372
Fmnl1	ENSMUSG00000055805
1700023F06Rik	ENSMUSG00000020940
Gm11647	ENSMUSG00000085360

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr11:103003337-103003352	GGGTCACACTGGCCT	+	6.53
EWSR1-FLI1	MA0149.1	chr11:103002861-103002879	GGAAGGAAGGAAAGTTGC	+	6.09
EWSR1-FLI1	MA0149.1	chr11:103002857-103002875	GTGAGGAAGGAAGGAAAG	+	7.24
KLF4	MA0039.3	chr11:103002757-103002768	GCAGGGTGTGG	-	6.62
ZNF263	MA0528.1	chr11:103003592-103003613	CTCTCTCTCTCCTCTTCCTTT	-	6.17
ZNF263	MA0528.1	chr11:103003586-103003607	CTCTCTCTCTCTCTCTCCTCT	-	6.22
ZNF263	MA0528.1	chr11:103003589-103003610	TCTCTCTCTCTCTCCTCTTCC	-	6.28
ZNF263	MA0528.1	chr11:103003912-103003933	AGGGGAGGAGGTTGGGGGGGG	+	6.34
ZNF263	MA0528.1	chr11:103003915-103003936	GGAGGAGGTTGGGGGGGGAGA	+	7.34
ZNF263	MA0528.1	chr11:103004021-103004042	TCCCTCAGCCCCTCCTCCTCC	-	7.62

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11520

chr11:102999817-103004470

Placenta

Enhancer Sequence

AGCAGAGCTT CCCTGTAGGG CTTTCCTGCT GCCTGCCTCC ACATCCTCCT ATTGGCCTGG 60
TGTGTGATCA GTTCCCTGTG TGAGCCACAG GCCTGACTCA CTGTGCAGTG GAGGGAGTCC 120
GTGGAGTGAA CTCGGAGATG CAGTCTGCCC CTCTACCCCT CCGGCAGATC CTATCCCGGT 180
GTCATCCCTG GCTAGTACCA AGGGTAACTG CAGTGGTCAC AGAAATTTAG CTCACCAGTG 240
AGCCCCTGTC TCTGGCCCCA GCACAGGGAG GAGCATGGAC CTGGAGGACT TGGTTTGCTT 300
CCCCCTTCCC GAGGTTTGGA ACGACCACGT TAGGCAAGAG AAGGGCCCAG TGCTGGGAAC 360
TGTGAAGGAT GGAAATGTTG ACAAACCCTG CGCATTGCCA GGACAACTTT TATTTCTGTA 420
CCGCCACACC CAGGCCTGCC CAGCACCTTC TACAACAGAC TAACAACTGA CTAGAGGGAG 480
AGATTGCTTT CAAGGGAAAG CAAAGTCCCA GGCCGAGGGC TCCATCCCCA GAGCCCTGGC 540
CAAAGGTTTG GCCTCCTCTT CCTGCATTCC CAGAGTGTTG TCAAGAACAC CAGCAGGAAC 600
GACTGTCCCC ACTTTGCAGA CGAGAAAGCT AAGGGTCAGA GAGGAAGTGA CTGTCCAGAT 660
TCCAGGGTAG CTTGTCAGGG GCCTGCAGTG TACTCGCCCG GTAGTCTGGG ACGCAGGGGC 720
TGCAGTCTCC AGCTGCTGCA TTCCTCAGAA CAGAGCCTGG AACAGAGCCT GGAGCGGAGG 780
GAGGACTAGG ACTAGGTTGT TTACCCAGAG GCAAGGCCCT GCTGTGTGTG TGTGTGTGTG 840
TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGAGTGTGTG TGACAAGGAA 900
GGGAAGAGAA GATTCCAAAG GGCTGCTGGT GTGTGTAGCA GGGTGTGGGT GGTCCGTGTG 960
TAACATGATT GCAGGTTGCT GGGCAAAGGG CAGGCAGGTA AGGAGGCTGG CCCCTCTCGG 1020
TCCAGAAGCT GAGAAGTGTG AGGAAGGAAG GAAAGTTGCC AGCTACCTCC ACCCTTCACA 1080
CACACACACA CACACACACA CACACACACA CACACACACA CACACAGTGG CCGAAGGGCT 1140
CTTGGCCAGG ACAGCACAGA GGTGAATTAA TTTCCCTAAG GCTGGGGGTT GGGGTGTGTG 1200
TGTGTCTGTG GTGACAATGG CCAGGGTGGA GCAAGGGGAA GACAAAGCAA AGGTTGTGAT 1260
CTGGGAAGCC TGACTGAAGG GAAAGGTCAG TGAAGAAAGT CTCCTGTCAG CTGGGGTCTC 1320
TAGCTGGTCC CCCAGCCTGA CGGTCAGCAG TGTCGAGAAG TCACCTTGAG AGCTCAGTAC 1380
TGGGGAGAGA TGGAGGCCAG GTGTGAGTGC CCACCCCCCA CCCCTCTTTT GCTGTTCTCT 1440
CTTTGGCAGT CCGTTCCTGA GGTCTGGACT CTTCTGTTCC AGTGTACAAC AGAGGCTCCT 1500
TGCACTTCCT CAGAGCTGGG TCACACTGGC CTTCAGAGCT CAGTGGCTTA CTTTCCTCTG 1560
ACCTCTTGAT TGCTGGGCCT TGTGAGGCCT GGAAAGCAAT TCCTTCCTGA GAATGATTGT 1620
GGAAGCTTCC CACAATGCCT GCTGGCCTGC CTGGCTGGAT CTCTCTCTCT CTCTCTCTCT 1680
CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCCCT 1740
CTCTCTCTCT CTCTCTCCCT CTCTCTCTCT CTCTCTCTCT CTCCTCTTCC TTTCTCAGGG 1800
ACTCTCTGAC CCCAGGTGGC AGTTCCAGTA CCCATAGGCA GATCCTTCCT GCGGTGGGGG 1860
TCAGGTACCG AAGGTGGTAA AATGGGCAGA GGTACCAGGG TAGGTCTAGA GGAAGCTTTG 1920
CAGATGTAAG GAAGTAAGTC AGTATGGGAA AGAGAGTGGC TGGTTCTGTT AGCCCTCTTG 1980
AGAACAGCAA GGTTGGCACT GGCCCTTTAA GTGGGGGTGC CAGCCAGTGC CCTCCCCCAG 2040
CCAACCCAAT TCATGGGCAC ACTGAGCATG TGCAAGATCT GTGCAAGTGA GGAGGGGAGG 2100
AGGTTGGGGG GGGAGATAGA TTCCGGAGGG AGCTTCCCAC CCCCCACTTC CTGTAGCTGC 2160
CCCCACTCTC CTTCCTGGGT CTGACAAAGG ACCCGTGGTG TTCCCTCAGC CCCTCCTCCT 2220
CCACAAACTA GGGGGCGCTT GCCCCTTGGG TCTGCTGAGC TACCAAGGGT TCTGAGGAGG 2280
CCCACTGGTC TCCCCAGTGC CTGGAGGTGG TGAGTGCCAG CCTGGCTTCT CTGGTGTGGG 2340
CGGAGGCCAA TCTTCTGCTC CTTACCATGT TCGATTTCAT TCCATCAGTG CCAGGCTTGT 2400
TGTTGTGATG TTGCTCTGGA AATGAGACAC ACAGAAAAGG GCGAGGTCCC TGCCCCCACC 2460
CACCAGGAGC TGGGGCTCTG CTTAGCCCCT GGGAGCCTGG TCCAGGGGAT GGAGCTCAGC 2520
TATCTACTTG CAGCATGCAG CATCCTCCCC TGTCACGGGG AAATCTACCC CCCCAGCCTC 2580
GAACTTGTTT CTGTAGCATC CTCAGACTCA GCTCCACCTG GGCAGTTGCT ATCCCCTCCC 2640
CTTTCCCTGG TCTTTGAACT TTAGGTACCA TTATCTTTCC TTAAACACAA GGGGAGGGCT 2700
GGGGATGTAG CTGGGTTGGT AGGATGCTTA CATCCTGTGC ATGGAACCCT GGGCTGAGAC 2760
TCAAGAGCAC ATAAAACCTG GTACAGTGCC TGGTACTTGT GAGGATGTGA AGGTCAAGGA 2820
CGTTTATCTC TATGTGAAAC CTTGTCCCCA GAAAGCAACT 2860