EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-04081

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:102602390-102603770

Target genes

Number: 21
Name	Ensembl ID

Tmem101	ENSMUSG00000020921
Tmub2	ENSMUSG00000034757
Slc25a39	ENSMUSG00000018677
Itga2b	ENSMUSG00000034664
Gpatch8	ENSMUSG00000034621
Gm11627	ENSMUSG00000078640
Fzd2	ENSMUSG00000050288
2810433D01Rik	ENSMUSG00000086283
Ccdc43	ENSMUSG00000020925
Adam11	ENSMUSG00000020926
Gjc1	ENSMUSG00000034520
Higd1b	ENSMUSG00000020928
Eftud2	ENSMUSG00000020929
Ccdc103	ENSMUSG00000020930
Gfap	ENSMUSG00000020932
Kif18b	ENSMUSG00000051378
2410004I01Rik	ENSMUSG00000085338
Nmt1	ENSMUSG00000020936
Dcakd	ENSMUSG00000020935
Plcd3	ENSMUSG00000020937
Acbd4	ENSMUSG00000056938

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MIXL1	MA0662.1	chr11:102603402-102603412	GTTAATTAGA	-	6.02
Nkx3-2	MA0122.3	chr11:102603289-102603302	TTTAAGTGGTATT	-	6.22

Enhancer Sequence

AAAAAAAAAA AAAAAAAAAA AGCTGTCATG CGCTAGTGGG TGGAGGGGTC TTGACAGTTT 60
TAGTTTCTCT GGGCTCACTC TCCTCACCGT AGCACAGCGC CAGTTCCCAC CTGGGCCCGG 120
GTAACCTCAA GGCATTTTTG CTCTGCTCTG CTTTCCTTCT TCTGGAGTGA GACCCCAGGA 180
TCATCAGAGG GCCCACTTTC ATCATAGCCC CGGGAGGCCC TGCCAGGATC GCCCCAGCTC 240
CCAGCCTGAG AGCCCAGCTT CCGCAGCCCT CCCAACAGCA GGAAGAAAAG GGAGGCGGTC 300
TTGAAGCGGC TCGCCCTGCT GGGGCCCAGT TCCTTGCCCC CCACAGCTTC CTCACATCCT 360
TTAACCTATT TTTCCCTTCC CTTGAGGGAA CACGTCCAGG AACAGAGTCA AGAACACGGA 420
AAGGTCAGTG TGGTAGCTTT CCCTCGTCTA ATTGCAATCC CTCCCTCTAT AAACACTTCC 480
CCACGGCTCC CTCGGAGGCA GCATCTGCTC GCTTCTCTGT GGCAGGAAGC AGGCTCAGCT 540
TCGGTTGCCC CCGCCTAGTT CCAGGGCTCA GGCCTTGGAT CTCTCCGGAG ACAGAAGTGC 600
ATCCAAGTGC AAGTGCAGAG CCTGCCCCGG GCCTAGGCTG CTTCGGAGCC AGGACCCCAT 660
GCAGAAGCTT GGCTCCTGCA TCTTCTGGCT GCTCCACACC GAGGTTCAGT GTCCTCTTCC 720
TTCTGATTCA GTAGCAGTTT GGGGTGGGCA GTTTGACAGC TGCCTACCGT TTTTTTTTTT 780
TTTTTTCAGA AATGCCAAAC TCTCTGAAAC TGACAAACAG GCAGATTGAT GGACTCTATC 840
TCCCTGTTCC TCTTGGACAG TGGGAGCTGC TACTCTGGGT GTTTCTCCCA AAGCTGCTCT 900
TTAAGTGGTA TTTATCTGTG CCCAAGCAGG AGCTAAGAAA AGTTTCCTGG CACTTCCTGA 960
CACTCTCAAT TCAAGGAATT CTATGGGGGA CTTGATTTTA ATCACTGTCT TGGTTAATTA 1020
GAAAGACAAG AAATTATCCC CCAAAAGTAA TTAATGGGGC CGTTAACCGA GGAGAAAGGG 1080
CTGCGTTTTG CTTGGGTCCT AGGATAGCCG CCAGTGGAGC TGGGACTGTG GGTCTCCAGC 1140
AGCTTCTTTG GGGAATATGA GGCTATTAGG TCTGGCATCC AGCCTGCCTG CTCTTCAATG 1200
GCACCACTGG TTACTGAGTT GACAGAACAG GGCACACTGC CTGCGAGCCT TTGTAAACTG 1260
CCAACACCTA GCCGGTAGGA GTGAATCCCA TGACTTATTG ATCCCCAATT TGTCCGTTTG 1320
GTGCCCTTTC ACCTTTGCCC TGCATTATCA GGAACCAGAG GTCACCTGTG TTGGTTTTCT 1380