EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-04033

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:101557050-101558490

Target genes

Number: 20
Name	Ensembl ID

Psmc3ip	ENSMUSG00000019303
Ramp2	ENSMUSG00000001240
Vps25	ENSMUSG00000078656
Ccdc56	ENSMUSG00000017188
Becn1	ENSMUSG00000035086
Psme3	ENSMUSG00000078652
Aarsd1	ENSMUSG00000075528
Rpl27	ENSMUSG00000063316
Ifi35	ENSMUSG00000010358
Rnd2	ENSMUSG00000001313
Vat1	ENSMUSG00000034993
Brca1	ENSMUSG00000017146
Nbr1	ENSMUSG00000017119
Rdm1	ENSMUSG00000010362
U2	ENSMUSG00000065767
Arl4d	ENSMUSG00000034936
Dhx8	ENSMUSG00000034931
Etv4	ENSMUSG00000017724
Meox1	ENSMUSG00000001493
Tmem101	ENSMUSG00000020921

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr11:101557814-101557825	GGGCGGGAAAG	+	6.32
FOXA1	MA0148.4	chr11:101557160-101557176	GTTTTTTTACTTAAGG	-	6.15
Nr5a2	MA0505.1	chr11:101558131-101558146	GTTGGCCTTGAATTT	-	6.3
PAX1	MA0779.1	chr11:101557206-101557223	GGTCATGCATGACTAGG	+	6.02

Enhancer Sequence

TCACCTTCGA TACACTTCCT CTCTCCTCAC CGGGATCCAC GCCCAAGTGT GCACACGGGA 60
ACATACACAT CTTACACTAT GTTAAACAAT CTTTATACCA ATCCCATAGT GTTTTTTTAC 120
TTAAGGGCTT TTGCTACCTC AGAATTAGTG TTTGCAGGTC ATGCATGACT AGGCATGACA 180
CAGAAATACA GGATGGCTTT TCTGGTCCTT TGTCTCTAGG GTGTTGGCTT TTCCACAGTG 240
GGAAACTGTG CTAAGGACAG TTAGATAAAC AAATGGCTCT TCCCAGCATG CCCTGCCTGC 300
TGGGGTACTG GATCCGGCCT GCGATCCTGG GTTCTTGCTC ACAAGTGAAT TAGCAGTAGT 360
GAGAAGGGTT GGATTGCCTT AAGTCTGAAC TTAAGAACCT CTCTCCTATT TCCAGTCTAC 420
GGAGGCAATA TAAAAATGTC CGATTTTACT CTAGCAAAGA CATTTGCCTC CTTCAGAGGT 480
AAGGCTGGCG ATGTCCTTCC CCAGCCAGGA GGTGGGGGGT GGGGAAGCTG TCTTTGTGTG 540
GTTTCCGCGC CGGCTCTTTC GGAGTTTGAT TTGCGGAGCA GGGAGGCACC CTAAGTGTCT 600
GCCATCAGTT CCCGGGATGA ATGGCTAAAT GAAGGCGCTG ATGAACAATT TGCATCTAAG 660
GGGCCGACTT GGGGTTTGGT GAATAGCCCA TGATTGTAGA TAAACACCAC CTGCCACGAT 720
GCTCGCGCCG CAGCCCCCCT TCTCTGGAGG GTGAGTTCTC TCTAGGGCGG GAAAGCTAGC 780
CTCCCCTCCC TCCACTCTCC GGTGCTTTTA TGCTAATGCT TTGGAGGAAG ATAGAAAACT 840
GGATTTCCAG GCTGTATAAC CGGTTCCTCT GGGGAGCAGA AAGAGCTCTT TCCTAATGGG 900
CTTCCTTTTT ACTTGGATTA AGATGGAAAC AGGGTGACCA CAGGAGCCCT TTCTGAGTCC 960
CCACAAGGCC CGGTTGTGTG GCCTGGGGAT TGACATTTTA TTGAAATGAG ACTCATAGAT 1020
TCCTGGGAGG CTGAAAATCT GCATTTGTTG TTTTTGTGAC AGGGTCTGTG TACGAAGTCT 1080
GGTTGGCCTT GAATTTGAGT CCCTTTTGCC TCAGACTCTG GAGTGCTGGG ATTATGCACT 1140
TCCGGACTGC TGGGATTTAA ATCCTGCATC ACCACAGCTG GGCCTCAAAG CACTCTTTAG 1200
AAATTCCAAG TGTATTCGCC ATAGCATGTA GTGGAGGTCA GAGGACAACT TTTACGTTTT 1260
GTTGTTGTTG TTGAGACAGG CTCTCTCTTT GTAGTCCTAG CTGTCCTGGA GTTCACTATG 1320
AAGACCAGGC TGGCTTCCAG TTCACAGAGA TCTACCTGCC TCTGCATCCT GAGTGCTGCG 1380
ATTAAGAGGC CTACCATGCC AGGCCTCAGA GAACAATTTT TGGAAATTGA TCTCTTCTAC 1440