EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-04010

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:101025780-101025970

Target genes

Number: 31
Name	Ensembl ID

Kat2a	ENSMUSG00000020918
Rab5c	ENSMUSG00000019173
Stat5b	ENSMUSG00000020919
Stat3	ENSMUSG00000004040
Ptrf	ENSMUSG00000004044
Atp6v0a1	ENSMUSG00000019302
Naglu	ENSMUSG00000001751
Coasy	ENSMUSG00000001755
Mlx	ENSMUSG00000017801
Psmc3ip	ENSMUSG00000019303
Fam134c	ENSMUSG00000017802
Tubg1	ENSMUSG00000035198
Tubg2	ENSMUSG00000045007
Cntnap1	ENSMUSG00000017167
Plekhh3	ENSMUSG00000035172
Ezh1	ENSMUSG00000006920
Vps25	ENSMUSG00000078656
Wnk4	ENSMUSG00000035112
Gm11615	ENSMUSG00000085083
Cntd1	ENSMUSG00000078653
Ccdc56	ENSMUSG00000017188
Becn1	ENSMUSG00000035086
Psme3	ENSMUSG00000078652
Aoc2	ENSMUSG00000078651
Aarsd1	ENSMUSG00000075528
Rpl27	ENSMUSG00000063316
Ifi35	ENSMUSG00000010358
Rnd2	ENSMUSG00000001313
Nbr1	ENSMUSG00000017119
U2	ENSMUSG00000065767
Dhx8	ENSMUSG00000034931

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EOMES	MA0800.1	chr11:101025947-101025960	GAGGTGTGAAAAC	+	6.78
TBR1	MA0802.1	chr11:101025948-101025958	AGGTGTGAAA	+	6.02
TBX2	MA0688.1	chr11:101025947-101025958	GAGGTGTGAAA	+	6.14

Enhancer Sequence

TGAGCCTGCA AGGGGAGGCA TGCGGCGTCA GTGGAGAAGC TGTAAAGACA CCTCCCGGTA 60
CGGAATCTGG GGAGGTTTGG GTTTGGGGAA AATCTCCCAT GGGGTATCCA CAATAATTAA 120
ATGAAGATGG TTGGAAATTA AGAGTTGTTC AAGCTGTGGT CGACCTGGAG GTGTGAAAAC 180
CAGAGATCCC 190