EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03917

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:97603930-97605750

Target genes

Number: 26
Name	Ensembl ID

Mrpl10	ENSMUSG00000001445
Npepps	ENSMUSG00000001441
Mrpl45	ENSMUSG00000018882
Arhgap23	ENSMUSG00000049807
Gm11611	ENSMUSG00000087042
Srcin1	ENSMUSG00000038453
2410003L11Rik	ENSMUSG00000085860
E130012A19Rik	ENSMUSG00000043439
Gm11613	ENSMUSG00000085586
Mllt6	ENSMUSG00000038437
Cisd3	ENSMUSG00000078695
Psmb3	ENSMUSG00000069744
Gm11614	ENSMUSG00000085145
Pip4k2b	ENSMUSG00000018547
Cwc25	ENSMUSG00000018541
Atp5l2	ENSMUSG00000084168
1700001P01Rik	ENSMUSG00000018543
Rpl23	ENSMUSG00000071415
Lasp1	ENSMUSG00000038366
B230217C12Rik	ENSMUSG00000050538
Fbxo47	ENSMUSG00000070336
Gm11630	ENSMUSG00000086917
Arl5c	ENSMUSG00000038352
Gm11629	ENSMUSG00000086716
Cacnb1	ENSMUSG00000020882
Rpl19	ENSMUSG00000017404

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFIC	MA0161.2	chr11:97604976-97604987	TTCTTGGCAGA	+	6.02
RREB1	MA0073.1	chr11:97604776-97604796	CCTCCCCCCACCCACCCCCA	+	6.35
RREB1	MA0073.1	chr11:97604780-97604800	CCCCCACCCACCCCCATTCT	+	6.55
RUNX1	MA0002.2	chr11:97605202-97605213	GTCTGTGGTTT	+	6.62

Enhancer Sequence

TTCCATCAGA TGCCCAGGTC TTCGCAGACT TATTGCTTGC CCATGAGAAA ACCAAATACC 60
ATCCAAATAC CATATACAAT CCCAGGAACC GGCATGCCCA GTGAGTGTGC GCGTGTGCAC 120
ACACACACAC CTTTCCCCAG TATATATTCA AGTTGAGATG CTTGGTCATG GCTGAGAGAG 180
TAAAAGGAAC AAAAGGCCTG TCACTCAAGA ACCGCCACTA ACCAACAGAG CCTCTTGGTG 240
CTGGACAAGG AACTGTATCT TCACGGCAAG CATAGGCAAG CTACCCCCGA GCCAAAGGCT 300
CTGTTCGGTC TCCGGAGTGA AATGAAGTTA CCCACCTTCA GGCTTTTGCT ACAGGATGCT 360
TTCTAGTGAG AGGCCAGATG TCAAACAAAA TCAAGGAGTG ACTCCCAGAA AGGGATGCAG 420
GGTTCACAAT TTGCTGACCC AGTTTCCCTG GGAATGTCAG ATGACCCCCG AAGCAAGAGG 480
AGCAAGCTCT GCTCACTGTT GATGTCCAGC TCCTTTAGAG GTCCGGGCAT CCCACTTCCC 540
GGCCAGGACA CTCATTAAGC CCAGGGATTC CATGGAAAAG GGGAATGTGC CCAAGACTAA 600
GAGGCCTGAG AGGACCTCAC AAACACATGC GCTCTTCTCT AAGACGTGGA GATCTACGCT 660
GGTGTAGGTG GCTGTCCCTC AATCTCTAGC CAAAGGACCC TCTAGGTCTT CTACCAAAGC 720
AAGAGAAAAT GAAGTCTCCC TGACCCTGGG TCCCTGGGTC ATTGTTTGGT CTTGTAGACA 780
ATTTCAAGTG TTCAGAAAAG TCATGGAGCC TAAAGAATGA AATCCGAAGG AGACCCGACC 840
CGTTATCCTC CCCCCACCCA CCCCCATTCT AAACTTGTGG CTGGTGGAGT CAGCACCTCA 900
GGTCTTTTCA CTTCCTCTGT TTGCTCTCAG TGTAGGGACT CACAAAGAAA CGGTGAGAAG 960
GCAGAGAGCA AGCCACCGAA AGAGAGCAGA TCCCAAACAA ACAGCACATA AACAGAGCCA 1020
ACCAGCTAAC GTCGGCCACA TCCAACTTCT TGGCAGAGGC TGCTGCACCA TCCCAAAGCA 1080
CCCAGGACCC AAAGGACCAC TCATCTGAGA CAGTAATCAC CATTATCACA CCCTGGAAAA 1140
CCATACGAGA AGTCAATGGC TTTGAAACAT CACAGAAGAA CGAGGAAGAT ACATTATTTC 1200
CATAACCAAG TCTACACTCC CTCGGGCCTT GTGCTCGCAC TTATCCTTCA TCCATGGGAA 1260
CACAAGTCAA GTGTCTGTGG TTTGGAGAAG TCTCTGCTTC TCCAGTTGAT ACGTCTTCAT 1320
GAAGAAGAAG AAGAAAAAAA GGAAACCCAG AGAGGATGTC CACAGTCAGG GGTAAGGAGG 1380
CCTAGAAGAT GGGAAACTTT GAGCAGCCAT ACCACCCAAA GGACCACAAA CAGGAACATT 1440
CAGGCAAGCC AGTCCCACTT GCCCTGTCAA CTGAGCAATG ATGTGGTAGC CAGCTATAAG 1500
AGACAAGCGG AATAGCCATG CAACAAACAC GCTGAGGGTA GAAGCAGCGT CGTTGCAGCA 1560
CCCAGGCCTT CCCTCGGAAG CTCCGGGGTT GCACGGAGCC AGCATACGGA CACAAGAAGC 1620
CAGAGGGGCT GGAGCGAAGG GGAAACGACG ACGGCATAGC ACGGGGACAC CAGGCCTCGC 1680
GTGGCGAACG GGGAGTGCAC GCCCGGCCGG ACAGCGTGCA CGGGTGGGCG GGCATGCAAG 1740
TGGCTCGGCG GAAGGGTTGC AGGCGTCACC CGCGGGGCGA GCGTGGCGAG GCCGGAGGGA 1800
GTGGGGGCGC GCACGGGGAA 1820