EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03880

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:96858170-96859290

Target genes

Number: 24
Name	Ensembl ID

Snx11	ENSMUSG00000020876
Cbx1	ENSMUSG00000018666
Gm11517	ENSMUSG00000081249
Nfe2l1	ENSMUSG00000038615
Copz2	ENSMUSG00000018672
D030028A08Rik	ENSMUSG00000078700
Cdk5rap3	ENSMUSG00000018669
Gm11525	ENSMUSG00000085307
Prr15l	ENSMUSG00000047040
Pnpo	ENSMUSG00000018659
Sp2	ENSMUSG00000018678
Sp6	ENSMUSG00000038560
Gm11532	ENSMUSG00000087067
Scrn2	ENSMUSG00000020877
Gm11533	ENSMUSG00000081860
Lrrc46	ENSMUSG00000020878
Mrpl10	ENSMUSG00000001445
Osbpl7	ENSMUSG00000038534
Gm11574	ENSMUSG00000085262
Kpnb1	ENSMUSG00000001440
Gm11592	ENSMUSG00000086680
Npepps	ENSMUSG00000001441
Mrpl45	ENSMUSG00000018882
Arhgap23	ENSMUSG00000049807

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZBTB18	MA0698.1	chr11:96859189-96859202	CAACATCTGGACA	-	6.05
ZNF263	MA0528.1	chr11:96859007-96859028	CTCCCCCCATCCCCCTTCTCC	-	6.72

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01232

chr11:96828195-96912552

Th_Cells

Enhancer Sequence

GGGATTTTCT CCCAAAAGAG CTTGATTTGA GAATTAAGGG TGAGAGAAAA AGAGAAGGTA 60
GATTTGCATG TGATTTACAT GTCAATTGTG TGAATTCCAG GCCACGTGTT CTCTGGAATC 120
TCCCTGGCTC CTGCTCCCTT GGCTGTGGTT TCCCCACCTG CTCGAGAGCC TCTTGGCTGC 180
CCCTTGTGTG GCCATAGCTG GGGAAAGTGG GTTCATCAAT TGGCCACTGG CTTCCCCAAT 240
ACCAACCAAA TTTCCTTAGA TCCTTCCTAA GGCCTGGTCC GCAGCCTTCC TCACTTCCCA 300
GCGTGGCTCC CAGGAGGTCC CCCTTAGGCT TGGTGGAAGA CTCGGGGACT GGCTCAGGCT 360
AGCCCGGTGC TCAGCACTCC GAGGCCTCTT GCCTCTCTGC CTTTCCCTAC GGAGACCCCC 420
GGGAAGAGCA ACTCAGCAGG AGCCCCGCGG GGCCTTGCCC TGGCCGCTGC CCTCCAGGGC 480
GGGTGAGAGT GGACCCTGAA CCCCAACTCG CCGCGCCCTC TGCAAGGCCG GGGTGTTCGG 540
CTGCAGTGGG CCGGCGAAGA GCTGTCCCCT CCCACTGGAG CCAAATAATT GCCTCCTGCT 600
TTGTTGTGTG GTGTCTGGGG CCCGGGGCCT CTCATTTGTG GGGACGTGCT GTGGCGAGAG 660
CCTCCCTGCG TAATTACCCT CCTCCCCATC GCCGCCGCCG CCGCCACTGA GCCTCCTGCG 720
TCCGCTGGGC CTTACTCACC CCCGCCTGGC CGGCCTGCTG CTCCCCCGCG GCCCAGACGC 780
AGGCAACTCC CTCCCGGTCC AAGCTGTCCT TTCCCGGCAG AGAACGTTTC TGCTTCTCTC 840
CCCCCATCCC CCTTCTCCAT ACAACCAACA CACACACACA CACACACACA CACACACACA 900
CACGTCTGGG GAAAAGCAGG GCAGGACAGG GTATTTCTAA TCTGAATGCA ACAGTCCCTC 960
TTGGGCCTTC ACTGGGGCTG ACTGAGAAAC TGGGTCCAGG GCACGCGCCT CGCTTTGCGC 1020
AACATCTGGA CAGCTGCACC TGTCGGGGCC TGTCCCCAGT TAAGGCTGGA GCTCCTTACG 1080
ACCCTGATAC CTAAAAGAAC ACACCCTAGC CAAACTCCTG 1120