EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03864

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:96282090-96283560

Target genes

Number: 21
Name	Ensembl ID

Phb	ENSMUSG00000038845
Igf2bp1	ENSMUSG00000013415
Snf8	ENSMUSG00000006058
Ube2z	ENSMUSG00000014349
Atp5g1	ENSMUSG00000006057
Gm11539	ENSMUSG00000083337
Gm53	ENSMUSG00000078706
Hoxb9	ENSMUSG00000020875
Hoxb8	ENSMUSG00000056648
Hoxb7	ENSMUSG00000038721
Hoxb6	ENSMUSG00000000690
Hoxb5	ENSMUSG00000038700
0610040B09Rik	ENSMUSG00000085645
Hoxb4	ENSMUSG00000038692
Hoxb3	ENSMUSG00000048763
Gm11536	ENSMUSG00000075589
Hoxb2	ENSMUSG00000075588
Hoxb3os	ENSMUSG00000084844
Hoxb1	ENSMUSG00000018973
Skap1	ENSMUSG00000057058
Cbx1	ENSMUSG00000018666

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr11:96283253-96283274	CTCCCCCTCCCCCCATCCCCT	-	6.02
ZNF263	MA0528.1	chr11:96282647-96282668	GGGGGTGGGGGTGGGGGGAGA	+	6.14
ZNF263	MA0528.1	chr11:96282641-96282662	GGAGGTGGGGGTGGGGGTGGG	+	6.15
ZNF263	MA0528.1	chr11:96283245-96283266	TGCCTCCCCTCCCCCTCCCCC	-	6.69

Enhancer Sequence

TCTCCTCAAA AGCATTCGCT TCATTCTCTT CTGCCTTGTA CCACCGTGGA GTACAAAGCC 60
TTATTCTAGT CCTAAAGAAG GTCCAGGGGA AGAAGAATGG ATTAGAATGA AAAACAAATC 120
TATCTAGAGG GACCCACAGA TCTCCAGCTC TGTCCCTGAG CTGGGGACAG GATGGAGAAG 180
TCCCAGGGAG CACAGGTCTG GAGAACTGGC ACAAGTTCCC AAATGACTTC TCCTGAGCCC 240
CAGGGACAGG AGCCGTCGGT CAAGTATGGA TTCTGCTTCC TTGGGCTTCT GGTTCTGTGT 300
GTGACCCACT GTGGGGGACC CATTAGCTTC CTTGTCAGTT CGTGGTCTTT TGTCCGAAGT 360
TTCACCGAGT CTACTGCCTT TAAGAAGCCC CTGCCAGTCA GCCTCTACCT GGAATGCAGT 420
CCTGGGAAGA CTCAGAATTG CTCTTCAAAA TGTTTAGCCG AGCAGATGGT TTGGAATGTG 480
AGCTCTGAAA TGCTTTCTTT GAAAAGCCAA GAGCTAAGGG AGTCTGGCAG CCAAGAAATG 540
GGGGTGAGGG TGGAGGTGGG GGTGGGGGTG GGGGGAGAAC TGATAATGAT GACCATGAAG 600
CAGTGACATT CTGCCAAGTT GCCGTAGGTG GGGAGCCAGA GTGGGAAGGG GAGGGGTGGC 660
CTTATTTTGT TATGTCACTG GCCTGATCTT GGGCCCCAGC TGGGAGGAAA GCATCAGTTG 720
CAGACACCCC CATCTCATCT CACAGCTCAC CAAATATTAC GGCCTCGCCC ATAAAAAACC 780
AGAGTCCTAA GCTGCCAGGA GTGTTAAACT CAAGGAGCTG TGACCAGAAA CAGGCGGGTT 840
CTGGGGAGGT ATCAGGGAGG CTGCAGCAGG GCCAGCAGCT CCCACTAAGA CCCTCCTGGC 900
TCTGAGGTGG TGACTGAGAC TGAGCAGCAA GCTTTTGCTT CCTGCCTCTC CCCAGCAAGA 960
GCGCTTAGAG GAGTCCTGCA ACTCCTTACC GGGAGCCGGG CTGCCTCGGA GCTGGAAATA 1020
AATGCCTTCA AGCCACATAA ATCAATGAAA ATTAGTAGGA GTCAAAGTAA AGATCCATCC 1080
TTCACCACTT GGATGTTTGA GCCAAGGTTC TTCTCGGTGA TTTAGAGCTG TATAATTGAG 1140
TGATTCCATC TCACTTGCCT CCCCTCCCCC TCCCCCCATC CCCTTTCCTT TCCAGGCAAA 1200
ATTCTCCCCT ATGAGGCAGG TTCCCACTGG CCTTTAGCTC CTCTGGCTGG AGCAGGTGTG 1260
CTCACCTGTC AGCTTGGCAC CCTGATGGAT CTCTGTGCTA TCTTGGTTGG CCTCCTCCCT 1320
GCCTGCCCCC TTAATGAATC GTCTGCCCCA GGCTAGGTAT GGAGTTGTGA GTAGGAGATA 1380
GCATTCTTCA TTGCTGCTCT CTCCTGTCCT CGCAGGAGCA GCAAGGCCCC CCCTGCTCAG 1440
GCCCCACCCA AACCTCAGAT CATCTTGGAA 1470