EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03823

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:95427970-95430130

Target genes

Number: 22
Name	Ensembl ID

Col1a1	ENSMUSG00000001506
Samd14	ENSMUSG00000047181
Myst2	ENSMUSG00000038909
Fam117a	ENSMUSG00000038893
Gm11521	ENSMUSG00000085509
Slc35b1	ENSMUSG00000020873
Spop	ENSMUSG00000057522
Gm11522	ENSMUSG00000083208
Nxph3	ENSMUSG00000046719
Ngfr	ENSMUSG00000000120
Phb	ENSMUSG00000038845
Gm9796	ENSMUSG00000045075
Zfp652	ENSMUSG00000075595
1110035M17Rik	ENSMUSG00000086191
B130006D01Rik	ENSMUSG00000075596
Phospho1	ENSMUSG00000050860
Gngt2	ENSMUSG00000038811
Abi3	ENSMUSG00000018381
Igf2bp1	ENSMUSG00000013415
Snf8	ENSMUSG00000006058
Ube2z	ENSMUSG00000014349
Atp5g1	ENSMUSG00000006057

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NKX2-5	MA0063.2	chr11:95428734-95428744	ACCACTTGAG	+	6.02
RREB1	MA0073.1	chr11:95428246-95428266	CAACCAACCATCCCCCCACA	+	6.1
RREB1	MA0073.1	chr11:95429343-95429363	TCAGTGGTGGTGGTGGGGGG	-	6.66
ZNF740	MA0753.2	chr11:95428948-95428961	CTCCCCCCCCCAC	+	6.52

Enhancer Sequence

TCTGGGTTCC TGGAATTTAC AGTAATTGAA TAATCACCCA GACGGGTGCC TAGCTGCAGA 60
GAGGGCTTAA GCAGTGTAAA GAAAAAGCGG GGCTCTGAAG CAGGAATCAA GAAACTTGGT 120
TTGGAGTTGG ATATGGTGGC ACACTCCGGC AGTTCCAATG AAGAGGCAGG AGGATCACAA 180
GTTTGAGGCT ACTCTTGGTT ATATATAGTG GTTCAGACTA GTCTGGGCTA TGGGAAACCC 240
TGTCAGAAAC AAAACAGATT AAACAAACCA ACCAACCAAC CAACCATCCC CCCACACACA 300
TACACACACA TACACGCACA CGCACGCACG CACACGCACA CACGCACACA TGGGGGAGGG 360
GTGGCTAATT TGGACCCAGG CAACCAGTCA GGCTTCCCTG AGGACTAGAC TGAGGTAACT 420
TGGTCAAGAA TATCCTAGAT AGAACAGCAC ACACAGCGGC CCTGTGGCTA AAGGAAATCC 480
CAACGTTTTC AGACTTCTGA GGCTGTTTTG GAGGCGCACA GAGAGTAAGG TCAACTGCTG 540
GATCTAGGCA ATGAGTCTGG GGGGTCTTGG GAGGGGCCTC ACACAGCCCC CACAGGACCA 600
CGGTAGGCAT GAGGAAGCTG AGTGTAGACA TTTAACTCCT GAGGTGGGGA CAGGAGGGGC 660
GGAAAAGGGC AGAGCTCCAC CAAGCCTTTT CCCACAGTGT AGGGAAGGGA TGGGGAGAGT 720
TTCGGCTCCT CCACGGCCCT GAGAGTCCTG AGAATATAGT CCAGACCACT TGAGCAGACT 780
CCACAGGAGC CCAGGCTGCC TCTCCCTGCC TCCCTCCCCT TGCGCGTCCC CTTCCTTTTC 840
TGGACCCTGG GCTCCAGTCT TTCTCCAGGC TGGGCTCTGT TCTCTTTCCT TCTGGGCCTG 900
CTACCTCACG CACCCCTAAG GGCCAGCTTC CATGTCCCTT CCCTGACCTT TCTGGGGCTG 960
GTTGGGCTTG ACTAGGACCT CCCCCCCCCA CACACACACT GCTTACACTT TATATGCCAG 1020
CTAGGGCTGC CTGCTGCAGC TCTCTGAAGA ATGCAGCCCC TGAAGAGACG ACTGAGCTTA 1080
TTCCCACCAG ACAGAATCTG GATTTTCCAC GTTGGGAGTG AAGGTGATAT TTACTTCATC 1140
AGGATGCAAA GTCCCTGAAG ATAGCAGATA TGCATCTGTC TTCACAGAAG GACTTCTATT 1200
CCTAATATAG AGAGCAGGTC CGTAATAGGA AGATGGGCCC CCCAAGACTG GGCCAATTTT 1260
CTCCTCCAGA CAGGGACTGT CTCTGCCATC ACTTTCCTAG TGCTGAGACT ATCCCTCCCA 1320
TCTCCTTGGA GTTTCTCCTC TCCTCCACCA TGTCATCTTC CTTGTCCACC CCATCAGTGG 1380
TGGTGGTGGG GGGAGAGACA AGAAGGCTCC TGTCTCCCTG GTGTCTGACT CTTGGCTGGG 1440
CCCCACTGGC CCCGCTCCCT TGGCCTGGAA GGCGGGAGGT TTATTTGCTG TTCTTCCTAG 1500
AAGAACAAAT CCTTCTCTTG CCTTCCAGAG CGACCACAAA CCACTCCCAC GAGAGGACCT 1560
GGATGATGGA CCAGAAAGTA AGAGGACCAG TTCTGACTAC CTGCCTCACC AGCCTCGGAA 1620
GGGGCGCAGC TTAGAGCCAG GGGTCCTAGA GGCTCCCTGG CCAGAAAGCC AAAATCTCTG 1680
GTTAGGATCA TCACAGAGTC TCAAGGGAAG GGCCTCCCTG CCTGCTGGGC CATCTGGACC 1740
CTGATCCTGT GTGTGTGAGC TTGTGTATGA GTATGCTTCT GTGTCTTACA GGCCATGTGG 1800
GTGGCTGGGA GCTGTAGAGT CATGACCCAG CCCTCCTAGC AAGCCTCTGG CTCCCCTGTG 1860
GTCAGTTTCA CTCTGACATC TGGTCCAGTT CACAGCTGGC CAGCTTCCTG CATGGCAGTT 1920
TTTCACTTTC CCTCTCTGAG ATCTGGGAGC AAAGGCCTCC TCACCCCGTT CTTTCCCCCC 1980
ACCCACTTCT TGACTGCATA CGAGAAGTTG CTAGATTCTG GTCAAAACTT CTAGAAAAAT 2040
GGACAGTTGG AAGTTATAAA GGTTAAGGGT TTCGGGGGGA AGGGTCGATG ATTTCTGCAT 2100
TTAATCCCAA CTAACAAAAC GTGGTTATTT CCAGAAAAAA AATTCTCTTG GCATCGTTTT 2160