EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03812

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:95074580-95076520

Target genes

Number: 19
Name	Ensembl ID

Col1a1	ENSMUSG00000001506
Sgca	ENSMUSG00000001508
Ppp1r9b	ENSMUSG00000038976
Samd14	ENSMUSG00000047181
Gm11513	ENSMUSG00000087630
Pdk2	ENSMUSG00000038967
Itga3	ENSMUSG00000001507
Dlx3	ENSMUSG00000001510
A730090H04Rik	ENSMUSG00000086552
Dlx4	ENSMUSG00000020871
Gm11515	ENSMUSG00000085992
Myst2	ENSMUSG00000038909
Gm11520	ENSMUSG00000085143
Fam117a	ENSMUSG00000038893
Gm11521	ENSMUSG00000085509
Slc35b1	ENSMUSG00000020873
Spop	ENSMUSG00000057522
Ngfr	ENSMUSG00000000120
Phb	ENSMUSG00000038845

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr11:95075072-95075091	GGTTGCCATCTGGTGGTAA	-	6.45
RREB1	MA0073.1	chr11:95076035-95076055	CCCCACCCCACCCCGCCCCC	+	6.8
ZNF143	MA0088.2	chr11:95075308-95075324	TGAGGCATTATGGGAG	-	6.48

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_02939

chr11:95009362-95119058

TACs

Enhancer Sequence

CCGAGCTTTC ATACATAAAG TCTCACATCC ACATCCTAGA CAGCTGTTCA TTCTGAAGTG 60
AGCTGGGGTA GCGGCTGACT TCTCTAGGCA GTCTGAAGCC TGGAGAAGGT TCAGGGTGTA 120
GATGTCGGTC CACTCTGCTC GGTCTTCTGT AACATCCACA CGACAGTGGA AAACACTGGA 180
GACCCCAAAT GCTCACACTG CTCCCATCCC AACGAAGCTG CTCACCCTCT GATGTATAGA 240
GGCCTAGGGC CTCTTTCCTC CATTATCCAG TGAGACTTCT CATCCAGGAA CTGTTGTCCT 300
GGGTCAATCT GTATGTGTGT AAACACACAC ACACATAAAT GTACATACAT GAATGCATAC 360
ATACCTTACC ACAGACACAC TACACATATA TACATGTAGA CCGTACAGGC CCACACATCT 420
GTGCGGGGAA CACAGAGCAG AGCCTGGAGA CTCCTGGCCA ACCAGGCAGC ACCTTAGAGG 480
AGGCAAGCCC CAGGTTGCCA TCTGGTGGTA ATTCCTCAAG GAGGAGATTT GCTCAGGTGA 540
CCCCTAGGTC GGACTCCTTT AAACAGCGCC AAATTGGCTT TGACACAGGC AACCTGGGGT 600
CACTGCTGGG GGAGGAAGAC CCAAGACTTT GAAGGCCACA CCCCTGTACT ACCTTGAAGC 660
CATTTCTGGG GTGAGCCTTC CAGCTGTGCA GCAGCCTTCT GCAGGCATTC CCGAGGAGTG 720
GCCGCATCTG AGGCATTATG GGAGGGGTGT GGGTGCAGGA GGGGTGGGGA TGTGGGAGCA 780
AGCCCTCCCT CTGCATACCC AGCTGCTTTC TTTCAGAAAA CACCAGACCC TTGCCTCTTC 840
TACACACAAG GTTCTGTCCA TCTTAAGACG TAACTATTTG CAGTGCAAAG AGAGAAAACT 900
GTGACCCAAG GGAGACCTGG GCAGCAGAGC TTAGGGAAAG TACACCCTAG GTTTGGCTGT 960
GAGTGCTTTG CGTGCAGCAC GGAGATGAGA CAGACAGGTG TCTGGACCCG TGGGGAATGT 1020
GGCATTGCTC GGCTTCAGGT CTCACGGTGG GCAAGCAGCC TGGCCTTGGG CCTCTCCCTC 1080
ACAGCCAGGC CCCCCAGGCT GGCCAGGGAG CTGTCAAATC CCCCACTCCA GAGACAAATG 1140
GAGCCGTCAG AGAAAATGGC TTGTAATGGG GAGCAGGAGC CAGGCTGGGC CGGGCTGGGG 1200
GAGGCCTCTG CTGGCCAGAT GTGAATTCTT CACTAATCAC ACCAAATTGG CCCAATTTGT 1260
TCACTGACAC GTGGGGGGAC CAGCTTCATC TTTCTCTCAC TGAGTGGGGT TCCCTCCCTC 1320
CTGCATGGAA ACACTTTTGC TCTGGAGCTG GGGCTGGCCA GCTGACAGCC AAGCTGTGGG 1380
GAAAGGTGCT GAGCCCTTCC CCTCTGGAGA CACAGGAACT GGCTCGGGCT TGCCTCTCCT 1440
CTGTCACTGT CAGCCCCCCA CCCCACCCCG CCCCCAGCTC TGGGTGCTGA TGTCACACTG 1500
TTTAAGGATC CTGAGGAGAA GAGAGCCGGG GCATCTGCTC TCTGCAACCA GGCAGCAGAG 1560
GTGGGAACTA GAGAATTAGA ACGACCTTGG GAGGAGCAGA GATGTTTTCT GGGAGAGACA 1620
CTGGGATGCT TTAGGGCAAG GCCAGGTCAT GTCTTTGGGG CAGCAGGTTT TTTCAGGGCC 1680
CTTCAAGACA CAAGCTCACA GACTGGTGAA GGAGCAAAAG AGCGCATTAG CCAACCCTAC 1740
ACTAAGGGTT CAGCCCAGGT TTGCCTTGAA CTCATAGCCT TTTGCACCTC AGCCTCATAA 1800
AGAACTGGGA TTCTAAGAGA GTGCCACCAT GCCTAGCTTA CCCATTGAAT CCTTGCACCA 1860
GAAACCCATG CTGTGGCAGA CAGTGTCGCT CCCTGCCTGC CGCAGCTCTT GTCCAGTATG 1920
TGTGAAGCCC TGGACTTGAT 1940